Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

scrophularia


Ploidy
Estimates
Phylogenetic
Tree
CCDB
Link








Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Phylogenetically reliable ? Ploidy age ?
scrophularia trifoliata 29 Polyploid 1.00 True 0.88
scrophularia racemosa 42 Polyploid 1.00 True 0.27
scrophularia auriculata 42 Polyploid 1.00 True 0.26
scrophularia valdesii 29 Polyploid 1.00 True 0.43
scrophularia grandiflora 29 Polyploid 1.00 True 0.56
scrophularia viciosoi 32 Polyploid 1.00 True 0.56
scrophularia oxyrhyncha 29 Polyploid 1.00 True 0.56
scrophularia sublyrata 29 Polyploid 1.00 True 0.56
scrophularia scorodonia 29 Polyploid 1.00 True 0.56
scrophularia lucida 13 Diploid 1.00 True
scrophularia canina 13 Diploid 1.00 True
scrophularia fontqueri 28 Polyploid 1.00 True 0.87
scrophularia olympica 13 Diploid 1.00 True
scrophularia hypericifolia 13 Diploid 1.00 True
scrophularia striata 13 Diploid 1.00 True
scrophularia rimarum 23 Polyploid 1.00 True 0.66
scrophularia xanthoglossa 13 Diploid 1.00 True
scrophularia deserti 13 Diploid 1.00 True
scrophularia hirta 29 Polyploid 1.00 True 0.46
scrophularia glabrata 28 Polyploid 1.00 True 0.46
scrophularia calliantha 29 Polyploid 1.00 True 0.82
scrophularia arguta 20 Polyploid 1.00 True 0.43
scrophularia lowei 20 Polyploid 1.00 True 0.38
scrophularia megalantha 19 Polyploid 1.00 True 2.94
scrophularia alpestris 34 Polyploid 1.00 True 2.65
scrophularia lanceolata 48 Polyploid 1.00 True 0.45
scrophularia divaricata 22 Polyploid 1.00 True 0.47
scrophularia herminii 26 Polyploid 1.00 True 0.99
scrophularia desertorum 48 Polyploid 1.00 True 0.85
scrophularia californica 47 Polyploid 1.00 True 0.83
scrophularia aestivalis 22 Polyploid 1.00 True 0.72
scrophularia nodosa 18 Uncertain False 0.49
scrophularia peregrina 18 Polyploid 0.97 True 1.66
scrophularia orientalis 20 Polyploid 1.00 True 2.50
scrophularia grayana 10 Diploid 1.00 True
scrophularia altaica 13 Diploid 1.00 True
scrophularia buergeriana 40 Polyploid 1.00 True 0.00
scrophularia kakudensis 18 Polyploid 1.00 True 0.88
scrophularia ningpoensis 45 Polyploid 1.00 True 0.90
scrophularia atrata 46 Polyploid 1.00 True 2.09
scrophularia montana 35 Polyploid 1.00 True 3.00
scrophularia marilandica 43 Polyploid 1.00 True 3.19
scrophularia parviflora 46 Polyploid 1.00 True 3.18
scrophularia villosa 47 Polyploid 1.00 True 3.12
scrophularia incisa 24 Polyploid 1.00 True 2.67
scrophularia lateriflora 20 Polyploid 1.00 True 3.28
scrophularia balbisii 39 Polyploid 1.00 True 2.92
scrophularia pyrenaica 29 Polyploid 1.00 True 3.28
scrophularia dentata 12 Diploid 1.00 True
scrophularia ramosissima 13 Diploid 1.00 True 1.53
scrophularia calycina 13 Diploid 0.99 True 1.46
scrophularia cryptophila 22 Polyploid 1.00 True 3.02
scrophularia czernjakowskiana 18 Polyploid 1.00 True 2.98
scrophularia decomposita 15 Diploid 0.40 True 2.23
scrophularia jafrii 30 Polyploid 1.00 True 3.18
scrophularia kotschyana 20 Polyploid 1.00 True 3.23
scrophularia mandshurica 48 Polyploid 1.00 True 2.86
scrophularia morisii 18 Polyploid 1.00 True 2.83
scrophularia multicaulis 12 Diploid 1.00 True
scrophularia obtusa 24 Polyploid 1.00 True 2.70
scrophularia olgae 14 Diploid 0.96 True 1.39
scrophularia omeri 12 Diploid 1.00 True
scrophularia pamirica 23 Polyploid 1.00 True 2.66
scrophularia polyantha 12 Diploid 1.00 True
scrophularia scoparia 30 Polyploid 1.00 True 3.16
scrophularia chrysantha 18 Polyploid 0.99 True 2.84
scrophularia heterophylla subsp. laciniata 13 Diploid 0.99 True 1.66
scrophularia himalensis 13 Diploid 0.97 True 1.52
scrophularia michoniana 15 Diploid 0.38 True 1.87
scrophularia latifolia 13 Diploid 0.99 True 0.42
scrophularia frutescens 13 Diploid 0.98 True 1.53
scrophularia edgeworthii 24 Polyploid 1.00 True 2.71
scrophularia robusta 21 Polyploid 1.00 True 2.98
scrophularia ebulifolia 28 Polyploid 1.00 True 3.21
scrophularia mellifera 29 Polyploid 1.00 True 3.25
scrophularia telavivensis 15 Diploid 0.50 True 2.06
scrophularia grandiflora subsp. reuteri 29 Polyploid 1.00 True 3.36
scrophularia heterophylla 13 Diploid 0.99 True 2.32
scrophularia provincialis 12 Diploid 1.00 True
scrophularia ani 39 Polyploid 1.00 True 2.90
scrophularia canina subsp. hoppii 12 Diploid 1.00 True 2.80
scrophularia californica var. oregana 45 Polyploid 1.00 True 3.06
scrophularia maximowiczii 20 Polyploid 1.00 True 3.21
scrophularia scabiosaefolia 20 Polyploid 1.00 True 3.25
scrophularia umbrosa 20 Polyploid 1.00 True 3.23
scrophularia variegata 12 Diploid 1.00 True
scrophularia sambucifolia 29 Polyploid 1.00 True 3.35
scrophularia anagae 30 Polyploid 1.00 True 3.09
scrophularia scopolii 13 Diploid 1.00 True 1.15
scrophularia suffruticans 29 Polyploid 1.00 True 3.33
scrophularia sciaphila 29 Polyploid 1.00 True 3.32
scrophularia frigida 13 Diploid 1.00 True
scrophularia smithii 29 Polyploid 1.00 True 3.32
scrophularia laevigata 29 Polyploid 1.00 True 3.32
scrophularia neomexicana 46 Polyploid 1.00 True 3.20
scrophularia vernalis 20 Polyploid 1.00 True 3.28
scrophularia amgunensis 20 Polyploid 1.00 True 3.23
scrophularia canina subsp. crithmifolia 12 Diploid 0.99 True 1.69
scrophularia litvinovii 18 Polyploid 1.00 True 2.91
scrophularia pseudoauriculata 42 Polyploid 1.00 True 3.12



Phylogenetic Tree:


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Tree Legend: Blue: Diploids , Red: Polyploids
Use your mouse to drag, zoom and modify the tree. CTRL + wheel = scale Y, ALT + wheel = scale X