Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

cuphea


Ploidy
Estimates
Phylogenetic
Tree
CCDB
Link








Ploidy Estimates:

[download]

Some columns hidden - click to show all

Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Phylogenetically reliable ? Ploidy age ?
cuphea hyssopifolia 16 Polyploid 1.00 True 7.88
cuphea llavea 9 Diploid 0.58 True 6.35
cuphea appendiculata 32 Polyploid 1.00 True 9.26
cuphea palustris 12 Polyploid 1.00 True 10.32
cuphea brachypoda 9 Diploid 0.37 False 7.61
cuphea schumannii 16 Polyploid 1.00 True 10.18
cuphea sessiliflora 7 Diploid 0.98 True 1.61
cuphea salvadorensis 16 Polyploid 1.00 True 10.14
cuphea pulchra 16 Polyploid 1.00 True 10.51
cuphea racemosa 20 Polyploid 1.00 True 8.95
cuphea pseudosilene 24 Polyploid 1.00 True 10.45
cuphea pseudovaccinium 7 Diploid 0.99 True 4.60
cuphea pascuorum 11 Polyploid 0.98 True 11.44
cuphea procumbens 9 Diploid 0.35 True 7.95
cuphea flavisetula 32 Polyploid 1.00 True 10.17
cuphea fuchsiifolia 7 Diploid 0.98 True 6.62
cuphea gaumeri 10 Polyploid 0.47 True 9.25
cuphea denticulata 8 Diploid 0.98 False 7.28
cuphea disperma 7 Diploid 0.99 True 5.07
cuphea ericoides 12 Polyploid 1.00 True 10.09
cuphea glutinosa 14 Polyploid 1.00 True 8.20
cuphea tolucana 12 Polyploid 1.00 True 10.18
cuphea setosa 11 Polyploid 0.99 True 11.45
cuphea salicifolia 8 Diploid 0.98 True 7.66
cuphea micrantha 8 Diploid 0.98 True 8.59
cuphea lutea 14 Polyploid 1.00 True 8.05
cuphea acinifolia 7 Diploid 0.98 True 5.35
cuphea watsoniana 16 Polyploid 1.00 True 10.45
cuphea utriculosa 11 Polyploid 0.99 True 11.35
cuphea aequipetala 12 Polyploid 1.00 True 10.13
cuphea strigulosa 8 Diploid 0.97 True 9.30
cuphea spermacoce 15 Polyploid 1.00 True 12.48
cuphea spectabilis 15 Polyploid 1.00 True 12.74
cuphea wrightii 10 Polyploid 0.54 True 8.93
cuphea parsonsia 16 Polyploid 1.00 True 10.23
cuphea melvilla 16 Polyploid 1.00 True 10.37
cuphea melanium 8 Diploid 0.98 True 13.32
cuphea mimuloides 11 Polyploid 0.99 True 11.56
cuphea micropetala 16 Polyploid 1.00 True 10.30
cuphea ignea 16 Polyploid 1.00 True 10.01
cuphea hyssopoides 9 Diploid 0.34 True 7.76
cuphea lutescens 7 Diploid 0.98 True 5.78
cuphea ingrata 14 Polyploid 1.00 True 7.95
cuphea circaeoides 11 Polyploid 0.98 True 11.35
cuphea calophylla subsp. mesostemon 8 Diploid 0.98 True 5.88
cuphea decandra 16 Polyploid 1.00 True 10.42
cuphea cyanea 6 Diploid 0.99 True 12.04
cuphea paucipetala 10 Polyploid 0.53 True 9.22
cuphea koehneana 12 Polyploid 1.00 True 10.49
cuphea confertiflora 9 Diploid 0.31 True 8.65
cuphea avigera var. pulcherrima 8 Diploid 0.98 True 8.13
cuphea linarioides 9 Diploid 0.38 True 7.63
cuphea lophostoma 8 Diploid 0.98 True 10.26
cuphea bustamanta 12 Polyploid 1.00 True 10.13
cuphea calcarata 7 Diploid 0.98 True 5.21
cuphea crassiflora 12 Polyploid 1.00 True 10.33
cuphea jorullensis 16 Polyploid 1.00 True 10.15
cuphea cordata 32 Polyploid 1.00 True 10.24
cuphea thymoides 18 Polyploid 1.00 True 9.54
cuphea urens 8 Diploid 0.97 True 8.24
cuphea teleandra 7 Diploid 0.97 True 7.49
cuphea sessilifolia 14 Polyploid 1.00 True 8.23
cuphea lanceolata 6 Diploid 0.99 True 8.90
cuphea leptopoda 8 Diploid 0.98 True 7.68
cuphea inflata 10 Polyploid 0.54 True 9.07
cuphea diosmifolia 7 Diploid 0.98 True 6.95
cuphea acicularis 18 Polyploid 1.00 True 9.56
cuphea lobophora 10 Polyploid 0.48 True 9.14
cuphea antisyphilitica 16 Polyploid 1.00 True 10.22
cuphea persistens 12 Polyploid 1.00 True 10.13
cuphea linifolia 16 Polyploid 1.00 True 10.32
cuphea ferrisiae 11 Polyploid 0.99 True 11.44
cuphea polymorpha 8 Diploid 0.98 True 9.90
cuphea gracilis 8 Diploid 0.98 True 9.37
cuphea ferruginea 9 Diploid 0.31 True 8.16
cuphea pterosperma 16 Polyploid 1.00 True 10.48
cuphea urbaniana 16 Polyploid 1.00 True 10.33
cuphea campestris 8 Diploid 0.99 True 7.26
cuphea grandiflora 16 Polyploid 1.00 True 10.21
cuphea acinos 7 Diploid 0.99 True 7.51
cuphea brachiata 8 Diploid 0.99 True 12.18
cuphea caesariata 18 Polyploid 1.00 True 9.61
cuphea calaminthifolia 12 Polyploid 1.00 True 10.00
cuphea campylocentra 8 Diploid 0.99 True 6.95
cuphea cuiabensis 16 Polyploid 1.00 True 10.21
cuphea cylindracea 24 Polyploid 1.00 True 10.29
cuphea dipetala 54 Polyploid 1.00 True 9.98
cuphea egleri 7 Diploid 0.98 True 6.56
cuphea elliptica 16 Polyploid 1.00 True 9.99
cuphea flavovirens 14 Polyploid 1.00 True 8.02
cuphea gardneri 14 Polyploid 1.00 True 8.25
cuphea glareosa 18 Polyploid 1.00 True 9.67
cuphea glossostoma 12 Polyploid 1.00 True 10.03
cuphea humifusa 18 Polyploid 1.00 True 9.63
cuphea impatientifolia 7 Diploid 0.99 True 3.86
cuphea laminuligera 10 Polyploid 0.49 True 9.07
cuphea myrtifolia 8 Diploid 0.99 True 8.03
cuphea nudicostata 30 Polyploid 1.00 True 10.31
cuphea odonellii 8 Diploid 0.98 True 7.07
cuphea painteri 12 Polyploid 1.00 True 9.97
cuphea pertenuis 12 Polyploid 1.00 True 10.24
cuphea pinetorum 11 Polyploid 0.99 True 11.37
cuphea quaternata 32 Polyploid 1.00 True 10.07
cuphea ramosissima 10 Polyploid 0.53 True 8.92
cuphea rasilis 16 Polyploid 1.00 True 10.12
cuphea retroscabra 56 Polyploid 1.00 True 9.36
cuphea sclerophylla 36 Polyploid 1.00 True 10.13
cuphea sincorana 14 Polyploid 1.00 True 8.17
cuphea trochilus 10 Polyploid 0.54 True 8.93
cuphea tuberosa 7 Diploid 0.98 True 5.29
cuphea varia 16 Polyploid 1.00 True 10.32
cuphea vesiculigera 12 Polyploid 1.00 True 10.02
cuphea viscosa 13 Polyploid 1.00 True 11.09
cuphea viscosissima 6 Diploid 0.99 True 7.32
cuphea vargasii 8 Diploid 0.98 True 5.94
cuphea reflexifolia 8 Diploid 0.98 True 8.84
cuphea caeciliae 30 Polyploid 1.00 True 10.30
cuphea calophylla 8 Diploid 0.99 True 5.41
cuphea avigera 10 Polyploid 0.50 False 8.73
cuphea megalophylla 16 Polyploid 1.00 True 10.35
cuphea carthagenensis 8 Diploid 0.97 True 9.11
cuphea ramiflora 7 Diploid 0.99 True 1.28
cuphea appendiculata var. axilliflora 84 Polyploid 1.00 True 9.33



Phylogenetic Tree:


Download tree:   phyloXML    newick

Tree Legend: Blue: Diploids , Red: Polyploids
Use your mouse to drag, zoom and modify the tree. CTRL + wheel = scale Y, ALT + wheel = scale X