Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

clarkia










Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Phylogenetically reliable ? Ploidy age ?
clarkia modesta 8 Diploid 0.98 True 1.89
clarkia unguiculata 9 Diploid 0.90 True 1.62
clarkia pulchella 12 Polyploid 0.97 True 2.54
clarkia amoena subsp. huntiana 7 Diploid 0.99 True 1.02
clarkia amoena subsp. caurina 7 Diploid 0.99 True 1.17
clarkia breweri 7 Diploid 0.98 True 0.79
clarkia mosquinii 6 Diploid 0.99 True 2.75
clarkia rhomboidea 12 Polyploid 0.97 True 2.53
clarkia australis 5 Diploid 0.99 True 1.86
clarkia virgata 5 Diploid 0.99 True 2.78
clarkia stellata 7 Diploid 0.99 True 2.74
clarkia gracilis subsp. albicaulis 14 Polyploid 1.00 True 1.38
clarkia gracilis subsp. sonomensis 14 Polyploid 1.00 True 1.27
clarkia tenella 17 Polyploid 1.00 True 2.76
clarkia concinna 7 Diploid 1.00 True 0.38
clarkia similis 17 Polyploid 1.00 True 2.81
clarkia imbricata 8 Diploid 0.96 True 1.62
clarkia epilobioides 9 Diploid 0.91 True 2.32
clarkia dudleyana 9 Diploid 0.91 True 1.32
clarkia amoena 7 Diploid 0.98 True 0.72
clarkia purpurea subsp. viminea 21 Polyploid 1.00 True 2.61
clarkia purpurea 26 Polyploid 1.00 True 2.76
clarkia rubicunda 7 Diploid 0.99 True 1.95
clarkia arcuata 7 Diploid 0.97 True 1.65
clarkia amoena subsp. whitneyi 7 Diploid 1.00 True 0.25
clarkia lingulata 9 Diploid 0.88 True 2.24
clarkia mildrediae 7 Diploid 0.99 True 2.84
clarkia speciosa 9 Diploid 0.91 True 2.27
clarkia exilis 9 Diploid 0.89 True 2.52
clarkia biloba 8 Diploid 0.97 True 1.62
clarkia davyi 17 Polyploid 1.00 True 2.79
clarkia cylindrica 9 Diploid 0.90 True 1.70
clarkia prostrata 26 Polyploid 1.00 True 2.75
clarkia bottae 9 Diploid 0.91 True 2.17
clarkia williamsonii 7 Diploid 0.98 True 2.53
clarkia heterandra 9 Diploid 0.89 True 1.95
clarkia amoena subsp. lindleyi 7 Diploid 0.99 True 1.36
clarkia lassenensis 7 Diploid 0.99 True 3.44
clarkia delicata 18 Polyploid 1.00 True 2.70
clarkia franciscana 7 Diploid 0.99 True 2.31
clarkia affinis 26 Polyploid 1.00 True 2.75
clarkia gracilis 14 Polyploid 1.00 True 2.64
clarkia xantiana 9 Diploid 0.90 True 2.16



Phylogenetic Tree:


Download tree:   phyloXML    newick

Tree Legend: Blue: Diploids , Red: Polyploids
Use your mouse to drag, zoom and modify the tree. CTRL + wheel = scale Y, ALT + wheel = scale X