Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

cirsium


Ploidy
Estimates
Phylogenetic
Tree
CCDB
Link








Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Phylogenetically reliable ? Ploidy age ?
cirsium rhaphilepis 11 Diploid 1.00 True
cirsium lineare 14 Diploid 0.97 True 0.17
cirsium velatum 16 Diploid 0.91 False 0.15
cirsium tracyi 12 Diploid 0.93 True 0.35
cirsium undulatum 13 Diploid 0.93 True 0.35
cirsium discolor 10 Diploid 1.00 True
cirsium muticum 10 Diploid 1.00 True
cirsium andrewsii 16 Diploid 1.00 True
cirsium quercetorum 16 Diploid 1.00 True
cirsium crassicaule 16 Diploid 1.00 True
cirsium douglasii 17 Diploid 1.00 True
cirsium edule 17 Diploid 1.00 True
cirsium rydbergii 17 Diploid 1.00 False
cirsium subniveum 17 Diploid 1.00 True
cirsium hydrophilum 16 Diploid 1.00 False
cirsium nuttallii 13 Diploid 1.00 False
cirsium horridulum 16 Diploid 1.00 False
cirsium ehrenbergii 18 Diploid 1.00 True
cirsium arizonicum 16 Diploid 1.00 True
cirsium drummondii 17 Diploid 1.00 False
cirsium jorullense 17 Diploid 1.00 True
cirsium lecontei 17 Diploid 1.00 True
cirsium mohavense 15 Diploid 1.00 True
cirsium inamoenum 17 Diploid 1.00 True
cirsium neomexicanum 15 Diploid 1.00 True
cirsium foliosum 17 Polyploid 1.00 True 0.22
cirsium pitcheri 17 Polyploid 1.00 True 0.22
cirsium ochrocentrum 16 Polyploid 1.00 True 0.18
cirsium flodmanii 11 Diploid 1.00 True
cirsium canescens 17 Polyploid 1.00 True 0.33
cirsium altissimum 9 Diploid 1.00 True
cirsium carolinianum 10 Diploid 1.00 True
cirsium wheeleri 14 Diploid 1.00 False 0.08
cirsium scariosum 17 Diploid 1.00 False
cirsium brevistylum 17 Diploid 1.00 True
cirsium remotifolium 16 Diploid 1.00 True
cirsium andersonii 16 Diploid 1.00 True
cirsium fontinale 17 Diploid 1.00 True
cirsium canum 17 Diploid 0.83 True 0.26
cirsium carniolicum subsp. rufescens 8 Diploid 0.99 True
cirsium erisithales 17 Diploid 1.00 True
cirsium rivulare 17 Diploid 1.00 True
cirsium oleraceum 17 Diploid 1.00 True
cirsium monspessulanum 17 Diploid 1.00 True
cirsium tymphaeum 16 Diploid 1.00 True
cirsium vulgare 34 Polyploid 1.00 True 0.54
cirsium arvense 17 Diploid 1.00 True
cirsium palustre 17 Diploid 1.00 True
cirsium spinosissimum 17 Diploid 1.00 True
cirsium echinus 17 Diploid 1.00 True
cirsium bertolonii 17 Diploid 1.00 True
cirsium alpis-lunae 17 Diploid 1.00 True
cirsium coryletorum 17 Diploid 1.00 True
cirsium japonicum 17 Diploid 1.00 True
cirsium nipponicum 34 Polyploid 1.00 True 0.65
cirsium tuberosum 17 Diploid 1.00 True
cirsium dissectum 17 Diploid 1.00 True
cirsium acaule 17 Diploid 1.00 True
cirsium kamtschaticum 34 Polyploid 1.00 True 1.70
cirsium occidentale var. venustum 15 Diploid 1.00 True
cirsium helenioides 17 Diploid 1.00 False
cirsium eriophorum 17 Diploid 1.00 True
cirsium purpuratum 17 Diploid 1.00 True
cirsium yezoense 17 Diploid 1.00 True
cirsium pendulum 17 Diploid 1.00 True
cirsium mexicanum 11 Diploid 1.00 True
cirsium aomorense 17 Diploid 1.00 True
cirsium alpicola 51 Polyploid 1.00 True 1.73
cirsium texanum 11 Diploid 1.00 True
cirsium cymosum var. canovirens 17 Diploid 1.00 True
cirsium heterophyllum 17 Diploid 1.00 True
cirsium pumilum var. hillii 15 Diploid 1.00 True
cirsium pectinellum 17 Diploid 1.00 True
cirsium grayanum 17 Diploid 1.00 True
cirsium repandum 15 Diploid 1.00 True
cirsium pannonicum 17 Diploid 1.00 True
cirsium echinatum 17 Diploid 1.00 True
cirsium pyrenaicum 17 Diploid 1.00 True
cirsium subcoriaceum 17 Diploid 1.00 True
cirsium scabrum 17 Diploid 1.00 True
cirsium ciliatum subsp. szovitsii 34 Polyploid 1.00 True 1.71
cirsium ganjuense 34 Polyploid 1.00 True 1.72
cirsium aidzuense 17 Diploid 1.00 True
cirsium simplex subsp. armenum 17 Diploid 1.00 True
cirsium nipponicum var. yoshinoi 17 Diploid 1.00 True
cirsium serratuloides 17 Diploid 1.00 True
cirsium arachnoideum 17 Diploid 1.00 True
cirsium pubigerum 34 Polyploid 1.00 True 1.73
cirsium monspessulanum subsp. ferox 17 Diploid 1.00 True
cirsium inundatum 51 Polyploid 1.00 True 1.75
cirsium bitchuense 34 Polyploid 1.00 True 1.70
cirsium matsumurae 34 Polyploid 1.00 True 1.72
cirsium engelmannii 10 Diploid 1.00 True
cirsium grahamii 16 Diploid 1.00 True
cirsium heiianum 17 Diploid 1.00 True
cirsium hupehense 14 Diploid 1.00 True
cirsium brachycephalum 17 Diploid 1.00 True
cirsium tenuisquamatum 17 Diploid 1.00 True
cirsium clokeyi 17 Diploid 1.00 True
cirsium scariosum var. americanum 17 Diploid 1.00 True
cirsium arizonicum var. rothrockii 15 Diploid 1.00 True
cirsium glabrum 17 Diploid 1.00 True
cirsium scariosum var. citrinum 17 Diploid 1.00 True
cirsium homolepis 17 Diploid 1.00 True
cirsium caucasicum 17 Diploid 1.00 True
cirsium confertissimum 34 Polyploid 1.00 True 1.76
cirsium longistylum 17 Diploid 1.00 True
cirsium anartiolepis 17 Diploid 1.00 True
cirsium grandirosuliferum 17 Diploid 1.00 True
cirsium horridulum var. megacanthum 16 Diploid 1.00 True
cirsium decussatum 17 Diploid 1.00 True
cirsium hidakamontanum 17 Diploid 1.00 True
cirsium parryi 17 Diploid 1.00 True
cirsium wallowense 17 Diploid 1.00 True
cirsium rosulatum 17 Diploid 1.00 True
cirsium glabrifolium 17 Diploid 1.00 True
cirsium wallichii 17 Diploid 1.00 True
cirsium shidokimontanum 34 Polyploid 1.00 True 1.67
cirsium morinifolium 17 Diploid 1.00 True
cirsium fontinale var. campylon 17 Diploid 1.00 True
cirsium hydrophilum var. vaseyi 16 Diploid 1.00 True
cirsium alsophilum 17 Diploid 1.00 True
cirsium filipendulum 17 Diploid 1.00 True
cirsium turkestanicum 17 Diploid 1.00 True
cirsium buergeri 34 Polyploid 1.00 True 1.69
cirsium argyracanthum 17 Diploid 1.00 True
cirsium edule var. macounii 17 Diploid 1.00 True
cirsium coahuilense 15 Diploid 1.00 True
cirsium pubigerum var. caniforme 34 Polyploid 1.00 True 1.64
cirsium strigosum 17 Diploid 1.00 True
cirsium tricholoma 17 Diploid 1.00 True
cirsium horridulum var. vittatum 16 Diploid 1.00 True
cirsium pascuarense 16 Diploid 1.00 True
cirsium adjaricum 17 Diploid 1.00 True
cirsium remotifolium var. rivulare 16 Diploid 1.00 True
cirsium latifolium 17 Diploid 1.00 True
cirsium rhizocephalum 17 Diploid 1.00 True
cirsium ashinokuraense 34 Polyploid 1.00 True 1.68
cirsium chrysacanthum 17 Diploid 1.00 True
cirsium skutchii 17 Diploid 1.00 True
cirsium creticum subsp. triumfetti 17 Diploid 1.00 True
cirsium lucens 17 Diploid 1.00 True
cirsium hachijoense 34 Polyploid 1.00 True 1.69
cirsium morii 17 Diploid 1.00 True
cirsium dealbatum 17 Diploid 1.00 True
cirsium interpositum 17 Diploid 1.00 True
cirsium eriophoroides 17 Diploid 1.00 True
cirsium nevadense 17 Diploid 1.00 True
cirsium macrobotrys 17 Diploid 1.00 True
cirsium acantholepis 17 Diploid 1.00 True
cirsium umezawanum 34 Polyploid 1.00 True 1.74
cirsium libanoticum 17 Diploid 1.00 True
cirsium hygrophilum 17 Diploid 1.00 True
cirsium kagamontanum 17 Diploid 1.00 True
cirsium scariosum var. congdonii 17 Diploid 1.00 True
cirsium occidentale var. candidissimum 30 Polyploid 1.00 True 1.06
cirsium amplexifolium 17 Diploid 1.00 True
cirsium hida-paludosum 17 Diploid 1.00 True
cirsium occidentalinipponense 17 Diploid 1.00 True
cirsium chokaiense 17 Diploid 1.00 True
cirsium osseticum 17 Diploid 1.00 True
cirsium esculentum 17 Diploid 1.00 True
cirsium lanceolatum 34 Polyploid 1.00 True 1.68
cirsium occidentale var. californicum 15 Diploid 1.00 True
cirsium yatsu-alpicola 34 Polyploid 1.00 True 1.72
cirsium obvallatum 17 Diploid 1.00 True
cirsium spinosissimum subsp. berthelonii 17 Diploid 1.00 True
cirsium pseudopersonata subsp. kusnezowianum 17 Diploid 1.00 True
cirsium griffithii 17 Diploid 1.00 True
cirsium vlassovianum 14 Diploid 1.00 True
cirsium ciliatum 10 Diploid 1.00 True
cirsium aitchisonii 17 Diploid 1.00 True
cirsium zawoense 34 Polyploid 1.00 True 1.67
cirsium spectabile 17 Diploid 1.00 True
cirsium virginianum 14 Diploid 1.00 True
cirsium haussknechtii 17 Diploid 1.00 True
cirsium tenuipedunculatum 17 Diploid 1.00 True
cirsium nigriceps 18 Diploid 1.00 True 0.29
cirsium hookerianum 17 Diploid 1.00 True
cirsium otayae 34 Polyploid 1.00 True 1.69
cirsium welwitschii 17 Diploid 1.00 True
cirsium tashiroi var. hidaense 17 Diploid 1.00 True
cirsium iowense 9 Diploid 1.00 True
cirsium conspicuum 17 Diploid 1.00 True
cirsium carniolicum 17 Diploid 1.00 True
cirsium syriacus 17 Diploid 1.00 True
cirsium pumilum 15 Diploid 1.00 False
cirsium trachylepis 17 Diploid 1.00 True
cirsium creticum 17 Diploid 1.00 True
cirsium fauriei 34 Polyploid 1.00 True 1.69
cirsium babanum 17 Diploid 1.00 True
cirsium ferox 17 Diploid 1.00 True
cirsium suzukaense 17 Diploid 1.00 True
cirsium hypoleucum 17 Diploid 1.00 True
cirsium congestissimum 17 Diploid 1.00 True
cirsium pyramidale 17 Diploid 1.00 True
cirsium cephalotes 17 Diploid 1.00 True
cirsium clavatum var. americanum 17 Diploid 1.00 True
cirsium dominii 34 Polyploid 1.00 True 1.70
cirsium brevicaule 17 Diploid 1.00 True
cirsium borealinipponense 17 Diploid 1.00 True
cirsium boninense 17 Diploid 1.00 True
cirsium eatonii var. peckii 16 Diploid 1.00 True
cirsium nivale 17 Diploid 1.00 True
cirsium rhothophilum 17 Diploid 1.00 True
cirsium subuliforme 17 Diploid 1.00 True
cirsium pseudopersonata 17 Diploid 1.00 True
cirsium schantarense 17 Diploid 1.00 True
cirsium heterotrichum 17 Diploid 1.00 True
cirsium douglasii var. breweri 15 Diploid 1.00 True
cirsium cymosum var. cymosum 15 Diploid 1.00 True
cirsium ugoense 17 Diploid 1.00 True
cirsium oligophyllum 17 Diploid 1.00 True
cirsium aggregatum 17 Diploid 1.00 True
cirsium nipponicum var. incomptum 34 Polyploid 1.00 True 1.71
cirsium cernuum 17 Diploid 1.00 True
cirsium arizonicum var. chellyense 17 Diploid 1.00 True
cirsium bulgaricum 15 Diploid 1.00 True
cirsium maritimum 17 Diploid 1.00 True
cirsium ligulare 17 Diploid 1.00 True
cirsium acaulon subsp. gregarium 17 Diploid 1.00 True
cirsium suffultum 34 Polyploid 1.00 True 1.70
cirsium shinanense 34 Polyploid 1.00 True 1.72
cirsium eatonii var. eriocephalum 17 Diploid 1.00 True
cirsium eatonii var. murdockii 17 Diploid 1.00 True
cirsium alatum 17 Diploid 1.00 True
cirsium gratiosum 17 Diploid 1.00 True
cirsium acrolepis 17 Diploid 1.00 True
cirsium acaulon 17 Diploid 1.00 True
cirsium magofukui 17 Diploid 1.00 True
cirsium furusei 17 Diploid 1.00 True
cirsium scariosum var. coloradense 17 Diploid 1.00 True
cirsium medium 18 Diploid 1.00 True
cirsium brevifolium 11 Diploid 1.00 True
cirsium komarovii 17 Diploid 1.00 True
cirsium oligophyllum var. nikkoense 17 Diploid 1.00 True
cirsium tenue 17 Diploid 1.00 True
cirsium steirolepis 17 Diploid 1.00 True
cirsium albescens 17 Diploid 1.00 True
cirsium kosmelii 17 Diploid 1.00 True
cirsium odontolepis 17 Diploid 1.00 True
cirsium candelabrum 17 Diploid 1.00 True
cirsium durangense 15 Diploid 1.00 True
cirsium dipsacolepis 17 Diploid 1.00 True
cirsium italicum 34 Polyploid 1.00 True 1.69
cirsium pulcherrimum 17 Diploid 1.00 True
cirsium sorocephalum 17 Diploid 1.00 True
cirsium mirabile 34 Polyploid 1.00 True 1.70
cirsium valentinum 17 Diploid 1.00 True
cirsium radians 17 Diploid 1.00 True
cirsium amplexifolium var. muraii 17 Diploid 1.00 True
cirsium ochrocentrum var. martinii 16 Diploid 1.00 True
cirsium okamotoi 17 Diploid 1.00 True
cirsium arisanense 17 Diploid 1.00 True
cirsium senjoense 34 Polyploid 1.00 True 1.69
cirsium flavispinum 17 Diploid 1.00 True
cirsium waldsteinii 34 Polyploid 1.00 True 1.72
cirsium arcense 17 Diploid 1.00 True
cirsium rhinoceros 17 Diploid 1.00 True
cirsium aduncum 17 Diploid 1.00 True
cirsium pyrenaicum var. longispinosum 17 Diploid 1.00 True
cirsium bracteosum 17 Diploid 1.00 True
cirsium japonicum var. maackii 17 Diploid 1.00 True
cirsium vallis-demonis 17 Diploid 1.00 True
cirsium appendiculatum 34 Polyploid 1.00 True 1.73
cirsium uzenense 17 Diploid 1.00 True
cirsium sieboldii 17 Diploid 1.00 True
cirsium apoense 34 Polyploid 1.00 True 1.67
cirsium diacanthum 16 Diploid 1.00 True
cirsium horiianum 17 Diploid 1.00 True
cirsium leucocephalum subsp. penicillatum 34 Polyploid 1.00 True 1.68
cirsium ashiuense 34 Polyploid 1.00 True 1.72
cirsium nippoense 34 Polyploid 1.00 True 1.70
cirsium rigidum 17 Diploid 1.00 True
cirsium tashiroi 17 Diploid 1.00 True
cirsium toyoshimae 17 Diploid 1.00 True
cirsium sommieri 17 Diploid 1.00 True



Phylogenetic Tree:


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Tree Legend: Blue: Diploids , Red: Polyploids
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