Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

brassica










Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Phylogenetically reliable ? Ploidy age ?
brassica macrocarpa 9 Diploid 1.00 True
brassica incana 9 Diploid 1.00 True
brassica oleracea 9 Diploid 1.00 True
brassica montana 9 Diploid 1.00 True
brassica cretica 9 Diploid 1.00 True
brassica napus 19 Polyploid 1.00 True 2.16
brassica juncea 18 Polyploid 1.00 True 1.77
brassica rapa 10 Diploid 1.00 True
brassica insularis 9 Diploid 1.00 True
brassica villosa 9 Diploid 1.00 True
brassica barrelieri 10 Diploid 1.00 True 0.07
brassica oxyrrhina 9 Diploid 1.00 True 0.38
brassica deflexa 7 Diploid 1.00 True
brassica balearica 16 Polyploid 1.00 True 7.47
brassica repanda 10 Diploid 1.00 True
brassica repanda subsp. latisiliqua 10 Diploid 1.00 True
brassica repanda subsp. blancoana 10 Diploid 1.00 True
brassica repanda subsp. saxatilis 10 Diploid 1.00 True
brassica desnottesii 10 Diploid 1.00 True
brassica gravinae 10 Diploid 1.00 True
brassica elongata 11 Diploid 1.00 True 0.26
brassica fruticulosa 8 Diploid 1.00 True
brassica tournefortii 10 Diploid 1.00 True 0.16
brassica carinata 17 Polyploid 1.00 True 1.81
brassica nigra 8 Diploid 1.00 True
brassica procumbens 9 Diploid 1.00 True 0.14
brassica spinescens 8 Diploid 1.00 True 0.18
brassica aucheri 7 Diploid 1.00 True
brassica rupestris 9 Diploid 1.00 True 0.14
brassica hilarionis 9 Diploid 1.00 True 0.15
brassica souliei subsp. amplexicaulis 11 Diploid 1.00 True 0.46
brassica bourgeaui 9 Diploid 1.00 True 0.15
brassica nivalis 10 Diploid 1.00 True 0.50
brassica tyrrhena 9 Diploid 1.00 True
brassica deflexa subsp. leptocarpa 7 Diploid 1.00 True
brassica villosa subsp. tinei 9 Diploid 1.00 True 0.35
brassica rapa subsp. trilocularis 10 Diploid 1.00 True 0.17
brassica elongata subsp. integrifolia 15 Polyploid 0.78 True 11.80
brassica glauca 10 Diploid 1.00 True 0.06
brassica nivalis subsp. jordanoffii 11 Diploid 1.00 True 0.51
brassica fruticulosa subsp. cossoniana 16 Polyploid 1.00 True 10.62
brassica repanda subsp. confusa 10 Diploid 1.00 True 0.33
brassica repanda subsp. cantabrica 10 Diploid 1.00 True
brassica fruticulosa subsp. numidica 16 Polyploid 0.99 True 10.76
brassica fruticulosa subsp. radicata 12 Diploid 0.93 True 8.85
brassica repanda subsp. africana 10 Diploid 1.00 True 0.33
brassica fruticulosa subsp. glaberrima 16 Polyploid 0.99 True 10.94
brassica souliei 11 Diploid 1.00 True 4.31
brassica villosa subsp. drepanensis 9 Diploid 1.00 True
brassica repanda subsp. maritima 10 Diploid 1.00 True 4.44
brassica cretica subsp. aegaea 9 Diploid 1.00 True 0.41
brassica repanda subsp. glabrescens 10 Diploid 1.00 True 0.80
brassica cantabrica 10 Diploid 1.00 True 0.22
brassica repanda subsp. almeriensis 10 Diploid 1.00 True 0.48



Phylogenetic Tree:


Download tree:   phyloXML    newick

Tree Legend: Blue: Diploids , Red: Polyploids
Use your mouse to drag, zoom and modify the tree. CTRL + wheel = scale Y, ALT + wheel = scale X