Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

zingiberaceae










Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Ploidy age ?
amomum villosum var. xanthioides 24 Polyploid 1.00 11.17
amomum kwangsiense 24 Polyploid 1.00 11.17
amomum gagnepainii 24 Polyploid 1.00 11.17
amomum macrodons 24 Polyploid 1.00 11.17
amomum hastilabium 24 Polyploid 1.00 11.17
amomum chinense 24 Polyploid 1.00 11.17
amomum rivale 24 Polyploid 1.00 11.17
amomum squarrosum 24 Polyploid 1.00 11.17
amomum testaceum 24 Polyploid 1.00 11.17
amomum lappaceum 24 Polyploid 1.00 11.17
amomum aculeatum 24 Polyploid 1.00 11.17
amomum muricarpum 24 Polyploid 1.00 11.17
amomum compactum 24 Polyploid 1.00 11.17
amomum uliginosum 24 Polyploid 1.00 11.17
amomum villosum 24 Polyploid 1.00 11.17
amomum longiligulare 24 Polyploid 1.00 11.17
amomum subulatum 24 Polyploid 1.00 11.17
amomum sericeum 24 Polyploid 1.00 11.17
amomum longipetiolatum 24 Polyploid 1.00 11.17
amomum maximum 24 Polyploid 1.00 11.17
amomum austrosinense 24 Polyploid 1.00 11.17
amomum putrescens 24 Polyploid 1.00 11.17
amomum repoeense 24 Polyploid 1.00 11.17
amomum kravanh 24 Polyploid 1.00 11.17
amomum menglunense 24 Polyploid 1.00 11.17
hornstedtia leonurus 24 Polyploid 1.00 11.17
hornstedtia hainanensis 24 Polyploid 1.00 11.17
etlingera triorgyalis 24 Polyploid 1.00 11.17
etlingera hemisphaerica 24 Polyploid 1.00 11.17
etlingera yunnanensis 24 Polyploid 1.00 11.17
etlingera littoralis 24 Polyploid 1.00 11.17
etlingera megalocheilos 24 Polyploid 1.00 11.17
etlingera maingayi 24 Polyploid 1.00 11.17
etlingera venusta 24 Polyploid 1.00 11.17
elettaria cardamomum 24 Polyploid 1.00 11.17
etlingera elatior 24 Polyploid 1.00 11.17
elettariopsis curtisii 24 Polyploid 1.00 6.90
elettariopsis rugosa 24 Polyploid 1.00 6.90
elettariopsis smithiae 24 Polyploid 1.00 6.90
elettariopsis trilobum 24 Polyploid 1.00 6.90
elettariopsis burtiana 24 Polyploid 1.00 6.90
renealmia africana 22 Polyploid 1.00 4.03
renealmia maculata 22 Polyploid 1.00 4.79
renealmia battenbergiana 22 Polyploid 1.00 4.21
aframomum spiroligulatum 24 Polyploid 1.00 2.68
aframomum alboviolaceum 24 Polyploid 1.00 2.68
aframomum mala 24 Polyploid 1.00 1.57
aframomum verrucosum 24 Polyploid 1.00 2.28
burbidgea schizocheila 24 Polyploid 1.00 4.93
siliquamomum tonkinense 24 Polyploid 1.00 3.96
alpinia bilamellata 25 Polyploid 1.00 2.50
alpinia nigra 24 Polyploid 1.00 2.23
alpinia rafflesiana 24 Polyploid 1.00 5.13
alpinia galanga 24 Polyploid 1.00 6.29
alpinia coriacea 24 Polyploid 1.00 7.21
alpinia coriandriodora 24 Polyploid 1.00 7.31
alpinia vittata 23 Polyploid 1.00 4.37
alpinia caerulea 24 Polyploid 1.00 3.95
alpinia tonkinensis 24 Polyploid 1.00 1.53
alpinia maclurei 24 Polyploid 1.00 1.59
alpinia stachyodes 24 Polyploid 1.00 1.69
alpinia intermedia 14 Polyploid 1.00 14.95
alpinia jianganfeng 24 Polyploid 1.00 0.02
alpinia oblongifolia 24 Polyploid 1.00 0.64
alpinia chinensis 24 Polyploid 1.00 1.01
alpinia japonica 24 Polyploid 1.00 0.88
alpinia officinarum 24 Polyploid 1.00 0.80
alpinia oxyphylla 24 Polyploid 1.00 0.50
alpinia kwangsiensis 24 Polyploid 1.00 1.47
alpinia hainanensis 24 Polyploid 1.00 1.47
alpinia formosana 24 Polyploid 1.00 1.47
alpinia zerumbet 24 Polyploid 1.00 1.47
alpinia roxburghii 24 Polyploid 1.00 1.47
alpinia polyantha 24 Polyploid 1.00 1.91
alpinia nutans 24 Polyploid 1.00 1.91
alpinia malaccensis 24 Polyploid 1.00 3.48
alpinia guinanensis 24 Polyploid 1.00 2.03
alpinia calcarata 24 Polyploid 1.00 2.13
alpinia aquatica 24 Polyploid 1.00 4.30
alpinia bambusifolia 24 Polyploid 1.00 7.25
alpinia boninensis 18 Polyploid 1.00 4.73
plagiostachys austrosinensis 48 Polyploid 1.00 7.30
boesenbergia belalongensis 12 Diploid 0.99 56.47
boesenbergia orbiculata 18 Polyploid 1.00 4.78
boesenbergia baimaii 12 Diploid 1.00 56.47
boesenbergia rotunda 18 Polyploid 1.00 2.97
boesenbergia longipes 10 Diploid 1.00 56.47
boesenbergia prainiana 10 Diploid 1.00 56.47
boesenbergia plicata 10 Diploid 1.00 56.47
boesenbergia longiflora 18 Polyploid 1.00 3.21
boesenbergia burthiana 12 Diploid 0.99 56.47
boesenbergia plicata var. lurida 10 Diploid 1.00 56.47
scaphochlamys oculata 14 Diploid 0.80 56.47
scaphochlamys kunstleri 14 Diploid 0.81 56.47
scaphochlamys biloba 13 Diploid 0.81 56.47
scaphochlamys perakensis 14 Diploid 0.81 56.47
zingiber ottensii 11 Diploid 1.00 56.47
zingiber griffithii 11 Diploid 1.00 56.47
zingiber nudicarpum 11 Diploid 1.00 56.47
zingiber multibracteatum 11 Diploid 1.00 56.47
zingiber monglaense 11 Diploid 1.00 56.47
zingiber chrysostachys 11 Diploid 1.00 56.47
zingiber neesanum 11 Diploid 1.00 56.47
zingiber corallinum 11 Diploid 1.00 56.47
zingiber montanum 11 Diploid 1.00 56.47
zingiber zerumbet 11 Diploid 1.00 56.47
zingiber spectabile 11 Diploid 1.00 56.47
zingiber ellipticum 11 Diploid 1.00 56.47
zingiber rubens 12 Diploid 1.00 56.47
zingiber striolatum 11 Diploid 1.00 56.47
zingiber roseum 11 Diploid 1.00 56.47
zingiber wightianum 11 Diploid 1.00 56.47
zingiber mioga 11 Diploid 1.00 56.47
zingiber officinale 11 Diploid 1.00 56.47
zingiber cylindricum 11 Diploid 1.00 56.47
kaempferia gilbertii 18 Polyploid 1.00 1.40
kaempferia angustifolia 27 Polyploid 1.00 1.36
kaempferia roscoeana 11 Diploid 1.00 56.47
kaempferia rotunda 22 Polyploid 1.00 3.25
kaempferia elegans 11 Diploid 1.00 56.47
kaempferia pulchra 11 Diploid 1.00 56.47
kaempferia galanga 27 Polyploid 1.00 1.87
kaempferia candida 11 Diploid 1.00 56.47
kaempferia ovalifolia 11 Diploid 1.00 56.47
kaempferia speciosa 11 Diploid 1.00 56.47
curcuma scaposa 21 Polyploid 1.00 1.19
curcuma prakasha 21 Polyploid 1.00 1.20
curcuma kudagensis 21 Polyploid 1.00 0.79
curcuma mutabilis 21 Polyploid 1.00 0.79
curcuma neilgherrensis 21 Polyploid 1.00 0.79
curcuma karnatakensis 21 Polyploid 1.00 0.56
curcuma vamana 11 Polyploid 0.50 3.72
curcuma cannanorensis 21 Polyploid 1.00 0.42
curcuma caulina 21 Polyploid 1.00 0.16
curcuma coriacea 21 Polyploid 1.00 0.43
curcuma longa 31 Polyploid 1.00 0.90
curcuma inodora 21 Polyploid 1.00 0.67
curcuma haritha 21 Polyploid 1.00 0.67
curcuma roscoeana 21 Polyploid 1.00 0.50
curcuma aurantiaca 21 Polyploid 1.00 1.36
curcuma petiolata 32 Polyploid 1.00 0.59
curcuma reclinata 21 Polyploid 1.00 1.36
curcuma comosa 21 Polyploid 1.00 1.36
curcuma mangga 21 Polyploid 1.00 1.36
curcuma rubrobracteata 21 Polyploid 1.00 1.36
curcuma zedoaria 32 Polyploid 1.00 0.71
curcuma montana 21 Polyploid 1.00 0.05
curcuma caesia 11 Polyploid 0.50 2.07
curcuma angustifolia 21 Polyploid 1.00 0.65
curcuma amada 21 Polyploid 1.00 0.65
curcuma aromatica 21 Polyploid 1.00 0.87
curcuma decipiens 21 Polyploid 1.00 0.98
curcuma pseudomontana 21 Polyploid 1.00 1.10
curcuma kwangsiensis 42 Polyploid 1.00 1.16
stahlianthus involucratus 11 Diploid 0.96 56.47
hedychium ellipticum 17 Polyploid 1.00 0.68
hedychium coccineum 18 Polyploid 1.00 0.69
hedychium thyrsiforme 12 Uncertain 1.00 2.83
hedychium flavescens 17 Polyploid 1.00 0.83
hedychium horsfieldii 17 Polyploid 1.00 1.10
hedychium spicatum 17 Polyploid 1.00 1.24
hedychium villosum 17 Polyploid 1.00 0.99
hedychium coronarium 17 Polyploid 1.00 1.48
hedychium greenii 18 Polyploid 1.00 1.94
hedychium gardnerianum 17 Polyploid 1.00 1.94
hedychium flavum 17 Polyploid 1.00 4.50
hedychium muluense 17 Polyploid 1.00 4.54
hedychium elwesii 33 Polyploid 1.00 4.77
hedychium gracile 33 Polyploid 1.00 4.74
cautleya gracilis 12 Diploid 0.89 56.47
cautleya spicata 13 Diploid 0.89 56.47
rhynchanthus beesianus 22 Polyploid 1.00 4.30
roscoea tibetica 12 Diploid 1.00 56.47
roscoea humeana 12 Diploid 1.00 56.47
roscoea cautleyoides 12 Diploid 1.00 56.47
roscoea schneideriana 12 Diploid 1.00 56.47
roscoea alpina 12 Diploid 1.00 56.47
roscoea debilis 12 Diploid 1.00 56.47
roscoea purpurea 13 Diploid 0.99 56.47
caulokaempferia coenobialis 12 Diploid 0.96 56.47
caulokaempferia alba 12 Diploid 0.98 56.47
caulokaempferia saxicola 10 Diploid 1.00 56.47
caulokaempferia yunnanensis 21 Polyploid 1.00 5.67
globba radicalis 10 Diploid 1.00 56.47
globba fragilis 16 Polyploid 1.00 3.99
globba variabilis 24 Polyploid 1.00 1.03
globba holttumii 24 Polyploid 1.00 1.01
globba multifolia 16 Polyploid 1.00 3.53
globba flavibracteata 24 Polyploid 1.00 0.49
globba cernua 16 Polyploid 1.00 3.62
globba curtisii 24 Polyploid 1.00 1.44
globba paniculata 16 Polyploid 1.00 2.57
globba albiflora 16 Polyploid 1.00 2.85
globba winitii 16 Polyploid 1.00 1.92
globba schomburgkii 24 Polyploid 1.00 0.68
globba marantina 24 Polyploid 1.00 0.68
globba obscura 16 Polyploid 1.00 2.13
globba laeta 16 Polyploid 1.00 2.13
globba racemosa 12 Diploid 0.99 56.47
globba clarkei 12 Diploid 0.99 56.47
globba sessiliflora 11 Diploid 0.99 56.47
globba spathulata 10 Diploid 1.00 56.47
globba substrigosa 14 Polyploid 0.68 4.66
globba nuda 17 Polyploid 1.00 4.90
globba reflexa 16 Polyploid 1.00 4.75
globba franciscii 16 Polyploid 1.00 4.94
globba pendula 16 Polyploid 1.00 4.72
globba kerrii 16 Polyploid 1.00 4.91
globba corneri 16 Polyploid 1.00 4.84
globba garrettii 16 Polyploid 1.00 4.80
globba purpurascens 16 Polyploid 1.00 4.73
globba emeiensis 12 Diploid 0.99 56.47
globba intermedia 24 Polyploid 1.00 4.70
globba nisbetiana 16 Polyploid 1.00 4.67
globba racemosa var. hookeri 11 Diploid 1.00 56.47
globba pendula subsp. montana 16 Polyploid 1.00 4.86
globba leucantha var. bicolor 16 Polyploid 1.00 4.91
globba patens 16 Polyploid 1.00 4.87
globba pendula var. elegans 16 Polyploid 1.00 4.85
siphonochilus aethiopicus 14 Polyploid 0.51 3.45
siphonochilus brachystemon 13 Polyploid 0.51 3.68
siphonochilus kirkii 14 Polyploid 0.51 3.33



Phylogenetic Tree:


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Tree Legend: Blue: Diploids , Red: Polyploids
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