Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

rutaceae










Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Ploidy age ?
cneoridium dumosum 18 Polyploid 1.00 20.25
micromelum integerrimum 9 Diploid 0.97 124.41
micromelum ceylanicum 9 Diploid 0.97 124.41
micromelum tephrocarpum 9 Diploid 0.97 124.41
murraya koenigii 9 Diploid 0.97 124.41
murraya paniculata 9 Diploid 0.97 124.41
glycosmis pentaphylla 9 Diploid 0.97 124.41
glycosmis parviflora 27 Polyploid 1.00 7.66
clausena dentata 9 Diploid 0.97 124.41
clausena heptaphylla 18 Polyploid 1.00 8.52
clausena pentaphylla 18 Polyploid 1.00 8.38
clausena lansium 9 Diploid 0.97 124.41
clausena excavata 18 Polyploid 1.00 6.19
clausena anisata 18 Polyploid 1.00 6.08
aegle marmelos 9 Diploid 0.97 124.41
atalantia ceylanica 9 Diploid 0.97 124.41
atalantia buxifolia 9 Diploid 0.97 124.41
atalantia citroides 9 Diploid 0.97 124.41
atalantia monophylla 9 Diploid 0.97 124.41
citrus halimii 9 Diploid 0.97 124.41
citrus iyo 9 Diploid 0.97 124.41
citrus limon 9 Diploid 0.97 124.41
citrus bergamia 9 Diploid 0.97 124.41
citrus aurantiifolia 9 Diploid 0.97 124.41
citrus hystrix 9 Diploid 0.97 124.41
citrus cavaleriei 9 Diploid 0.97 124.41
citrus nobilis 9 Diploid 0.97 124.41
citrus reticulata 9 Diploid 0.97 124.41
citrus jambhiri 9 Diploid 0.97 124.41
citrus maxima 9 Diploid 0.97 124.41
citrus webberi 9 Diploid 0.97 124.41
citrus tamurana 9 Diploid 0.97 124.41
citrus longispina 9 Diploid 0.97 124.41
citrus reshni 9 Diploid 0.97 124.41
citrus volkameriana 9 Diploid 0.97 124.41
citrus sulcata 9 Diploid 0.97 124.41
citrus aurantium 9 Diploid 0.97 124.41
citrus wilsonii 9 Diploid 0.97 124.41
citrus suavissima 9 Diploid 0.97 124.41
citrus assamensis 9 Diploid 0.97 124.41
citrus pennivesiculata 9 Diploid 0.97 124.41
citrus australis 9 Diploid 0.97 124.41
citrus glauca 9 Diploid 0.97 124.41
citrus sinensis 9 Diploid 0.97 124.41
citrus japonica 9 Diploid 0.97 124.41
citrus medica 9 Diploid 0.97 124.41
citrus meyerii 9 Diploid 0.97 124.41
citrus trifoliata 9 Diploid 0.97 124.41
citrus australasica 9 Diploid 0.97 124.41
citrus matsudaidai 9 Diploid 0.97 124.41
citrus acida 9 Diploid 0.97 124.41
citrus chuana 9 Diploid 0.97 124.41
citrus spaerocarpa 9 Diploid 0.97 124.41
citrus mitis 9 Diploid 0.97 124.41
citrus aurantiaca 9 Diploid 0.97 124.41
citrus microcarpa 9 Diploid 0.97 124.41
citrus tardiferox 9 Diploid 0.97 124.41
citrus paradisi 9 Diploid 0.97 124.41
correa alba 16 Polyploid 1.00 10.09
correa reflexa 16 Polyploid 1.00 10.09
correa lawrenceana 16 Polyploid 1.00 10.09
correa backhouseana 16 Polyploid 1.00 10.09
limonia acidissima 9 Diploid 0.97 124.41
aeglopsis chevalieri 9 Diploid 0.97 124.41
naringi crenulata 9 Diploid 0.97 124.41
citropsis articulata 9 Diploid 0.97 124.41
swinglea glutinosa 9 Diploid 0.97 124.41
triphasia trifolia 9 Diploid 0.97 124.41
paramignya monophylla 18 Polyploid 1.00 7.98
merrillia caloxylon 9 Diploid 0.97 124.41
ruta graveolens 36 Polyploid 1.00 9.17
ruta montana 18 Polyploid 1.00 9.01
ruta corsica 9 Diploid 0.97 124.41
ruta chalepensis 18 Polyploid 1.00 9.29
ruta oreojasme 18 Polyploid 1.00 9.11
ruta pinnata 20 Polyploid 1.00 6.69
ruta angustifolia 20 Polyploid 1.00 6.68
ruta patavina 9 Diploid 0.97 124.41
ruta obtusifolia 9 Diploid 0.97 124.41
boenninghausenia albiflora 10 Diploid 0.96 124.41
haplophyllum dubium 18 Polyploid 1.00 12.73
haplophyllum latifolium 9 Diploid 0.97 124.41
haplophyllum dauricum 9 Diploid 0.97 124.41
haplophyllum tuberculatum 9 Diploid 0.97 124.41
haplophyllum perforatum 9 Diploid 0.97 124.41
orixa japonica 17 Polyploid 1.00 31.77
coleonema pulchrum 17 Polyploid 1.00 15.90
coleonema album 17 Polyploid 1.00 14.24
ptelea trifoliata 21 Polyploid 1.00 23.40
esenbeckia febrifuga 32 Polyploid 1.00 15.35
esenbeckia leiocarpa 32 Polyploid 1.00 14.54
esenbeckia irwiniana 32 Polyploid 1.00 14.86
tetradium daniellii 38 Polyploid 1.00 9.50
tetradium ruticarpum 38 Polyploid 1.00 3.18
tetradium glabrifolium 18 Polyploid 1.00 12.89
chorilaena quercifolia 14 Polyploid 1.00 14.00
diplolaena grandiflora 13 Polyploid 1.00 15.37
eriostemon australasius 17 Polyploid 1.00 6.26
eriostemon scaber 14 Polyploid 1.00 22.14
eriostemon virgatus 14 Polyploid 1.00 22.14
eriostemon difformis 15 Polyploid 1.00 22.14
eriostemon myoporoides 14 Polyploid 1.00 22.14
eriostemon obovalis 28 Polyploid 1.00 6.98
eriostemon spicatus 28 Polyploid 1.00 6.85
eriostemon hispidulus 14 Polyploid 1.00 22.14
eriostemon brevifolius 28 Polyploid 1.00 7.07
eriostemon buxifolius 14 Polyploid 1.00 22.14
melicope simplex 18 Polyploid 1.00 6.04
melicope ternata 18 Polyploid 1.00 8.71
melicope grisea 18 Polyploid 1.00 6.89
melicope barbigera 18 Polyploid 1.00 9.05
melicope micrococca 18 Polyploid 1.00 8.10
melicope mantellii 18 Polyploid 1.00 13.22
flindersia australis 54 Polyploid 1.00 7.19
flindersia xanthoxyla 18 Polyploid 1.00 8.65
flindersia bourjotiana 18 Polyploid 1.00 12.59
flindersia schottiana 18 Polyploid 1.00 6.84
skimmia anquetilia 15 Polyploid 1.00 21.21
skimmia arborescens 15 Polyploid 1.00 21.21
skimmia laureola 15 Polyploid 1.00 21.21
skimmia japonica 15 Polyploid 1.00 21.21
skimmia rubella 15 Polyploid 1.00 21.21
skimmia repens 15 Polyploid 1.00 21.21
skimmia veitchii 15 Polyploid 1.00 21.21
dictamnus albus 18 Polyploid 1.00 13.59
casimiroa edulis 18 Polyploid 1.00 15.65
pilocarpus spicatus 44 Polyploid 1.00 9.98
pilocarpus pennatifolius 22 Polyploid 1.00 25.99
pilocarpus grandiflorus 22 Polyploid 1.00 25.99
pilocarpus microphyllus 22 Polyploid 1.00 25.99
pilocarpus carajaensis 44 Polyploid 1.00 10.01
pilocarpus giganteus 22 Polyploid 1.00 25.99
pilocarpus sulcatus 22 Polyploid 1.00 25.99
pilocarpus trachylophus 22 Polyploid 1.00 25.99
pilocarpus spicatus subsp. longeracemosus 44 Polyploid 1.00 9.79
pilocarpus spicatus var. lealii 44 Polyploid 1.00 10.04
ravenia spectabilis 18 Polyploid 1.00 21.93
calodendrum capense 27 Polyploid 1.00 13.39
adenandra uniflora 19 Polyploid 1.00 5.40
adenandra odoratissima 21 Polyploid 1.00 4.74
adenandra fragrans 21 Polyploid 1.00 4.63
adenandra dahlgrenii 24 Polyploid 1.00 3.53
adenandra multiflora 25 Polyploid 1.00 7.05
adenandra villosa subsp. biseriata 25 Polyploid 1.00 6.95
adenandra marginata subsp. serpyllacea 21 Polyploid 1.00 4.73
zanthoxylum scandens 34 Polyploid 1.00 10.35
zanthoxylum nitidum 34 Polyploid 1.00 4.91
zanthoxylum bungeanum 35 Polyploid 1.00 5.37
zanthoxylum armatum 33 Polyploid 1.00 5.40
zanthoxylum acanthopodium 32 Polyploid 1.00 10.22
zanthoxylum americanum 34 Polyploid 1.00 13.88
zanthoxylum oxyphyllum 36 Polyploid 1.00 10.61
zanthoxylum clava-herculis 36 Polyploid 1.00 10.64
zanthoxylum hawaiiense 68 Polyploid 1.00 14.07
zanthoxylum gilletii 32 Polyploid 1.00 10.36
zanthoxylum petiolare 36 Polyploid 1.00 10.33
zanthoxylum atchoum 32 Polyploid 1.00 10.23
zanthoxylum tomentellum 36 Polyploid 1.00 10.57
zanthoxylum zanthoxyloides 36 Polyploid 1.00 10.20
zanthoxylum ovalifolium 18 Polyploid 1.00 29.28
zanthoxylum rhetsa 34 Polyploid 1.00 13.64
toddalia asiatica 18 Polyploid 1.00 26.06
phellodendron amurense 38 Polyploid 1.00 1.26
phellodendron chinense 39 Polyploid 1.00 1.96
phellodendron lavallei 38 Polyploid 1.00 10.07
phellodendron sachalinense 40 Polyploid 1.00 10.22
phebalium glandulosum 16 Polyploid 1.00 31.96
phebalium drummondii 32 Polyploid 1.00 11.76
phebalium microphyllum 32 Polyploid 1.00 11.81
phebalium ralstonii 16 Polyploid 1.00 31.96
phebalium ozothamnoides 32 Polyploid 1.00 11.55
phebalium nottii 16 Polyploid 1.00 31.96
phebalium coxii 16 Polyploid 1.00 31.96
phebalium squamulosum 16 Polyploid 1.00 31.96
phellodendron japonicum 39 Polyploid 1.00 26.16
pitavia punctata 18 Polyploid 1.00 21.41
neoschmidia pallida 20 Polyploid 1.00 14.27
philotheca tubiflora 14 Polyploid 1.00 15.20
drummondita miniata 14 Polyploid 1.00 13.89
boronia denticulata 9 Diploid 0.97 124.41
boronia megastigma 7 Diploid 0.97 124.41
boronia anemonifolia 18 Polyploid 1.00 9.93
boronia ledifolia 16 Polyploid 1.00 7.50
boronia deanei 11 Diploid 0.89 124.41
boronia pilosa 11 Diploid 0.89 124.41
boronia citriodora 54 Polyploid 1.00 9.97
boronia fastigiata 9 Diploid 0.97 124.41
boronia anethifolia 18 Polyploid 1.00 10.17
boronia pulchella 7 Diploid 0.97 124.41
boronia ramosa 18 Polyploid 1.00 10.00
boronia crenulata 9 Diploid 0.97 124.41
boronia spathulata 9 Diploid 0.97 124.41
boronia pinnata 11 Diploid 0.87 124.41
boronia polygalifolia 18 Polyploid 1.00 10.27
boronia purdieana 9 Diploid 0.97 124.41
boronia floribunda 11 Diploid 0.90 124.41
boronia keysii 16 Polyploid 1.00 7.39
boronia microphylla 11 Diploid 0.89 124.41
boronia muelleri 11 Diploid 0.87 124.41
boronia parviflora 9 Diploid 0.97 124.41
boronia serrulata 11 Diploid 0.90 124.41
boronia thujona 11 Diploid 0.86 124.41
boronia chartacea 16 Polyploid 1.00 7.17
boronia clavata 7 Diploid 0.97 124.41
boronia crassifolia 9 Diploid 0.97 124.41
boronia mollis 16 Polyploid 1.00 7.37
boronia molloyae 8 Diploid 0.97 124.41
boronia rigens 18 Polyploid 1.00 10.17
boronia crenulata subsp. viminea 9 Diploid 0.97 124.41
boronia coerulescens 36 Polyploid 1.00 10.08
boronia nana var. pubescens 18 Polyploid 1.00 10.10
boronia gracilipes 8 Diploid 0.97 124.41
boronia fraseri 16 Polyploid 1.00 7.50
boronia algida 10 Diploid 0.97 124.41
boronia filifolia 9 Diploid 0.97 124.41
boronia heterophylla 7 Diploid 0.97 124.41
boronia elatior 8 Diploid 0.97 124.41
boronia barkeriana 9 Diploid 0.97 124.41
boronia nematophylla 9 Diploid 0.97 124.41
acronychia suberosa 18 Polyploid 1.00 11.76
acronychia pubescens 17 Polyploid 1.00 11.76
acronychia laevis 18 Polyploid 1.00 11.76
acronychia pedunculata 18 Polyploid 1.00 11.76
platydesma rostrata 18 Polyploid 1.00 7.04
platydesma cornuta 18 Polyploid 1.00 7.04
neobyrnesia suberosa 12 Polyploid 0.12 9.11
zieria smithii 36 Polyploid 1.00 0.61
zieria pilosa 18 Polyploid 1.00 11.31
zieria citriodora 36 Polyploid 1.00 0.22
zieria covenyi 27 Polyploid 1.00 0.15
zieria involucrata 18 Polyploid 1.00 11.31
zieria odorifera 18 Polyploid 1.00 11.31
zieria southwellii 18 Polyploid 1.00 11.31
zieria robusta 18 Polyploid 1.00 11.31
zieria aspalathoides 36 Polyploid 1.00 0.36
zieria cytisoides 36 Polyploid 1.00 1.10
zieria furfuracea 18 Polyploid 1.00 11.31
zieria adenodonta 18 Polyploid 1.00 11.31
zieria minutiflora 18 Polyploid 1.00 11.31
zieria laxiflora 18 Polyploid 1.00 11.31
zieria laevigata 36 Polyploid 1.00 1.36
zieria veronicea 18 Polyploid 1.00 11.31
zieria caducibractata 18 Polyploid 1.00 11.31
euodia fraxinifolia 36 Polyploid 1.00 9.80
agathosma ovata 13 Polyploid 0.87 1.27
agathosma apiculata 13 Polyploid 0.87 2.11
erythrochiton brasiliensis 58 Polyploid 1.00 25.95
cneorum pulverulentum 18 Polyploid 1.00 11.47
cneorum tricoccon 18 Polyploid 1.00 11.10
diosma subulata 15 Polyploid 1.00 19.69
diosma oppositifolia 15 Polyploid 1.00 12.12
diosma aristata 15 Polyploid 1.00 20.05
crowea saligna 19 Polyploid 1.00 22.39
crowea angustifolia var. platyphylla 19 Polyploid 1.00 21.17
leionema diosmeum 16 Polyploid 1.00 17.95
leionema nudum 16 Polyploid 1.00 16.79
leionema dentatum 16 Polyploid 1.00 18.02
leionema elatius subsp. beckleri 16 Polyploid 1.00 16.97
geleznowia verrucosa 14 Polyploid 0.92 33.78
asterolasia correifolia 14 Polyploid 0.95 32.19
ptelea baldwinii 21 Polyploid 1.00 36.31
muiriantha hassellii 14 Polyploid 0.95 32.91
nematolepis elliptica 16 Polyploid 1.00 28.31
euchaetis avisylvana 14 Polyploid 0.97 33.22
vepris hiernii 36 Polyploid 1.00 33.86
ptelea isophylla 21 Polyploid 1.00 35.77
ptelea serrata 21 Polyploid 1.00 35.66
ptelea lutescens 21 Polyploid 1.00 36.26
ptelea nitens 21 Polyploid 1.00 36.04



Phylogenetic Tree:


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Tree Legend: Blue: Diploids , Red: Polyploids
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