Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

melanthiaceae










Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Ploidy age ?
toxicoscordion paniculatum 11 Polyploid 0.99 24.44
toxicoscordion fremontii 11 Polyploid 0.99 24.44
toxicoscordion venenosum var. gramineum 11 Polyploid 0.99 24.44
toxicoscordion nuttallii 11 Polyploid 0.99 24.44
toxicoscordion exaltatum 11 Polyploid 0.99 24.44
toxicoscordion fontanum 11 Polyploid 0.99 24.44
toxicoscordion micranthum 11 Polyploid 0.99 24.44
toxicoscordion venenosum 11 Polyploid 0.99 24.44
toxicoscordion brevibracteatum 11 Polyploid 0.99 24.44
schoenocaulon ghiesbreghtii 8 Polyploid 0.94 16.92
schoenocaulon officinale 8 Polyploid 0.94 16.92
schoenocaulon comatum 8 Polyploid 0.94 16.92
schoenocaulon tenorioi 8 Polyploid 0.94 16.92
schoenocaulon caricifolium 8 Polyploid 0.94 16.92
schoenocaulon calcicola 8 Polyploid 0.94 16.92
schoenocaulon dubium 8 Polyploid 0.94 16.92
schoenocaulon texanum 8 Polyploid 0.94 16.92
schoenocaulon intermedium 8 Polyploid 0.94 16.92
schoenocaulon oaxacense 8 Polyploid 0.94 16.92
schoenocaulon jaliscense 8 Polyploid 0.94 16.92
amianthium muscitoxicum 16 Polyploid 1.00 11.50
veratrum oxysepalum 32 Polyploid 1.00 0.92
veratrum fimbriatum 16 Polyploid 1.00 2.21
veratrum stamineum 16 Polyploid 1.00 2.21
veratrum grandiflorum 16 Polyploid 1.00 2.68
veratrum dahuricum 16 Polyploid 1.00 2.68
veratrum viride 16 Polyploid 1.00 2.68
veratrum dolichopetalum 16 Polyploid 1.00 2.68
veratrum album 16 Polyploid 1.00 2.68
veratrum insolitum 16 Polyploid 1.00 2.68
veratrum viride var. eschscholtzianum 16 Polyploid 1.00 2.71
veratrum californicum 16 Polyploid 1.00 2.71
veratrum anticleoides 8 Polyploid 0.94 22.77
veratrum longibracteatum 8 Polyploid 0.94 22.77
veratrum maackii 8 Polyploid 0.94 22.77
veratrum maackii var. parviflorum 8 Polyploid 0.94 22.77
veratrum nigrum 8 Polyploid 0.94 22.77
veratrum schindleri 8 Polyploid 0.94 22.77
veratrum formosanum 8 Polyploid 0.94 22.77
veratrum versicolor 8 Polyploid 0.94 22.77
veratrum albiflorum 16 Polyploid 1.00 12.48
stenanthium gramineum 10 Polyploid 0.94 6.08
stenanthium densum 10 Polyploid 0.94 6.08
anticlea elegans var. glaucus 16 Polyploid 1.00 0.26
anticlea mogollonensis 16 Polyploid 1.00 0.41
anticlea virescens 16 Polyploid 1.00 0.41
anticlea occidentalis 8 Polyploid 0.94 9.24
anticlea sibirica 16 Polyploid 1.00 1.05
anticlea vaginata 16 Polyploid 1.00 1.04
anticlea elegans 16 Polyploid 1.00 1.54
veratrum maackii var. japonicum 8 Polyploid 0.94 10.81
veratrum lobelianum 16 Polyploid 1.00 12.40
helonias bullata 17 Polyploid 1.00 10.30
ypsilandra thibetica 17 Polyploid 1.00 10.47
heloniopsis orientalis 17 Polyploid 1.00 10.47
heloniopsis orientalis var. flavida 17 Polyploid 1.00 10.47
heloniopsis orientalis var. breviscapa 17 Polyploid 1.00 10.47
heloniopsis kawanoi 17 Polyploid 1.00 10.47
heloniopsis umbellata 17 Polyploid 1.00 10.47
heloniopsis leucantha 17 Polyploid 1.00 10.47
chionographis koidzumiana 12 Polyploid 1.00 26.52
chionographis hisauchiana 21 Polyploid 1.00 0.77
chionographis japonica 12 Polyploid 1.00 26.52
chionographis hisauchiana subsp. minoensis 21 Polyploid 1.00 0.74
chionographis hisauchiana subsp. kurohimensis 22 Polyploid 1.00 0.77
xerophyllum asphodeloides 15 Polyploid 1.00 24.81
xerophyllum tenax 15 Polyploid 1.00 24.81
pseudotrillium rivale 5 Diploid 1.00 118.32
trillium erectum 5 Diploid 1.00 118.32
trillium rugelii 5 Diploid 1.00 118.32
trillium vaseyi 5 Diploid 1.00 118.32
trillium catesbaei 5 Diploid 1.00 118.32
trillium sulcatum 5 Diploid 1.00 118.32
trillium flexipes 5 Diploid 1.00 118.32
trillium cernuum 5 Diploid 1.00 118.32
trillium tschonoskii 10 Polyploid 1.00 1.40
trillium apetalon 10 Polyploid 1.00 0.77
trillium camschatcense 5 Diploid 1.00 118.32
trillium smallii 15 Polyploid 1.00 1.49
trillium ovatum 5 Diploid 1.00 118.32
trillium nivale 5 Diploid 1.00 118.32
trillium grandiflorum 5 Diploid 1.00 118.32
trillium pusillum 5 Diploid 1.00 118.32
trillium stamineum 5 Diploid 1.00 118.32
trillium discolor 5 Diploid 1.00 118.32
trillium viride 5 Diploid 1.00 118.32
trillium petiolatum 5 Diploid 1.00 118.32
trillium lancifolium 5 Diploid 1.00 118.32
trillium recurvatum 5 Diploid 1.00 118.32
trillium sessile 5 Diploid 1.00 118.32
trillium cuneatum 5 Diploid 1.00 118.32
trillium luteum 5 Diploid 1.00 118.32
trillium angustipetalum 5 Diploid 1.00 118.32
trillium chloropetalum 5 Diploid 1.00 118.32
trillium decumbens 5 Diploid 1.00 118.32
trillium decipiens 5 Diploid 1.00 118.32
paris fargesii 5 Diploid 1.00 118.32
paris polyphylla var. chinensis 5 Diploid 1.00 118.32
paris polyphylla 5 Diploid 1.00 118.32
paris cronquistii 5 Diploid 1.00 118.32
paris fargesii var. petiolata 20 Polyploid 1.00 1.11
paris dunniana 5 Diploid 1.00 118.32
paris vietnamensis 5 Diploid 1.00 118.32
paris delavayi 5 Diploid 1.00 118.32
paris marmorata 5 Diploid 1.00 118.32
paris daliensis 5 Diploid 1.00 118.32
paris luquanensis 5 Diploid 1.00 118.32
paris polyphylla var. yunnanensis 5 Diploid 1.00 118.32
paris mairei 5 Diploid 1.00 118.32
paris polyphylla var. stenophylla 5 Diploid 1.00 118.32
paris rugosa 5 Diploid 1.00 118.32
paris forrestii 5 Diploid 1.00 118.32
paris dulongensis 5 Diploid 1.00 118.32
paris axialis 5 Diploid 1.00 118.32
paris vaniotii 5 Diploid 1.00 118.32
paris thibetica 5 Diploid 1.00 118.32
paris thibetica var. apetala 5 Diploid 1.00 118.32
paris japonica 20 Polyploid 1.00 4.12
paris tetraphylla 5 Diploid 1.00 118.32
paris incompleta 5 Diploid 1.00 118.32
paris quadrifolia 10 Polyploid 1.00 0.72
paris verticillata 5 Diploid 1.00 118.32
paris bashanensis 5 Diploid 1.00 118.32
paris polyphylla var. latifolia 5 Diploid 1.00 118.32
trillium undulatum 5 Diploid 1.00 118.32
trillium channellii 10 Polyploid 1.00 5.56
trillium hagae 15 Polyploid 1.00 5.39
trillium rhombifolium 15 Polyploid 1.00 5.68
trillium pusillum var. virginianum 5 Diploid 1.00 118.32
trillium govanianum 10 Polyploid 1.00 5.88
trillium parviflorum 5 Diploid 1.00 118.32
trillium miyabeanum 10 Polyploid 1.00 5.62
trillium 㗠10 Polyploid 1.00 5.54



Phylogenetic Tree:


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Tree Legend: Blue: Diploids , Red: Polyploids
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