Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

lythraceae










Ploidy Estimates:

[download]

Some columns hidden - click to show all

Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Ploidy age ?
heimia myrtifolia 8 Diploid 0.95 60.22
heimia salicifolia 8 Diploid 0.95 60.22
heimia montana 8 Diploid 0.95 60.22
didiplis diandra 16 Polyploid 1.00 11.96
rotala rotundifolia 14 Polyploid 1.00 8.14
rotala ramosior 8 Diploid 0.96 60.22
rotala indica 16 Polyploid 1.00 10.97
lawsonia inermis 15 Polyploid 1.00 11.01
ammannia latifolia 24 Polyploid 1.00 2.19
ammannia baccifera 13 Polyploid 0.99 1.48
ammannia prieuriana 16 Polyploid 1.00 2.46
ammannia auriculata 16 Polyploid 1.00 2.50
ammannia coccinea 33 Polyploid 1.00 2.40
ammannia robusta 17 Polyploid 1.00 2.42
ammannia senegalensis 20 Polyploid 1.00 1.70
ammannia multiflora 9 Polyploid 0.92 13.99
ammannia rotundifolia 15 Polyploid 1.00 2.20
duabanga grandiflora 24 Polyploid 1.00 3.45
duabanga moluccana 24 Polyploid 1.00 3.22
lagerstroemia indica 24 Polyploid 1.00 17.21
lagerstroemia parviflora 24 Polyploid 1.00 17.21
lagerstroemia speciosa 24 Polyploid 1.00 17.21
lagerstroemia floribunda 24 Polyploid 1.00 17.21
trapa natans 24 Polyploid 1.00 15.99
trapa incisa 44 Polyploid 1.00 0.50
trapa japonica 40 Polyploid 1.00 0.93
trapa muzzanensis 24 Polyploid 1.00 15.99
trapa rossica 24 Polyploid 1.00 15.99
sonneratia alba 11 Polyploid 1.00 17.69
sonneratia apetala 11 Polyploid 1.00 17.69
sonneratia caseolaris 11 Polyploid 1.00 17.69
sonneratia ovata 11 Polyploid 1.00 17.69
sonneratia hainanensis 11 Polyploid 1.00 17.69
sonneratia gulngai 11 Polyploid 1.00 17.69
lythrum portula 5 Diploid 0.98 60.22
lythrum borysthenicum 15 Polyploid 1.00 3.80
lythrum flagellare 10 Polyploid 1.00 8.19
lythrum junceum 5 Diploid 0.98 60.22
lythrum virgatum 15 Polyploid 1.00 2.54
lythrum salicaria 30 Polyploid 1.00 2.44
lythrum ovalifolium 10 Polyploid 1.00 0.60
lythrum hyssopifolia 10 Polyploid 1.00 1.39
lythrum maritimum 10 Polyploid 1.00 9.33
lythrum alatum 5 Diploid 0.95 60.22
lythrum tribracteatum 5 Diploid 0.94 60.22
lythrum thymifolia 5 Diploid 0.95 60.22
lythrum curtissii 10 Polyploid 1.00 9.15
lythrum baeticum 5 Diploid 0.96 60.22
lythrum volgense 5 Diploid 0.98 60.22
lythrum acutangulum 5 Diploid 0.98 60.22
lythrum myrtifolium 30 Polyploid 1.00 9.19
lythrum gracile 10 Polyploid 1.00 9.00
lythrum flexuosum 5 Diploid 0.96 60.22
lythrum hyssopifolium 10 Polyploid 1.00 9.03
capuronia madagascariensis 8 Diploid 0.98 60.22
galpinia transvaalica 8 Diploid 0.99 60.22
lafoensia acuminata 8 Diploid 1.00 60.22
lafoensia pacari 8 Diploid 1.00 60.22
lafoensia densiflora 8 Diploid 1.00 60.22
lafoensia nummularifolia 8 Diploid 1.00 60.22
lafoensia vandelliana 8 Diploid 1.00 60.22
punica granatum 8 Diploid 0.96 60.22
cuphea hyssopifolia 16 Polyploid 1.00 7.75
cuphea llavea 9 Diploid 0.72 60.22
cuphea appendiculata 32 Polyploid 1.00 9.40
cuphea palustris 12 Polyploid 1.00 10.02
cuphea brachypoda 9 Diploid 0.61 60.22
cuphea schumannii 16 Polyploid 1.00 10.54
cuphea sessiliflora 7 Diploid 1.00 60.22
cuphea salvadorensis 16 Polyploid 1.00 10.46
cuphea pulchra 16 Polyploid 1.00 10.34
cuphea racemosa 20 Polyploid 1.00 8.57
cuphea pseudosilene 24 Polyploid 1.00 10.47
cuphea pseudovaccinium 7 Diploid 0.99 60.22
cuphea pascuorum 11 Polyploid 0.99 11.04
cuphea procumbens 9 Diploid 0.58 60.22
cuphea flavisetula 32 Polyploid 1.00 10.20
cuphea fuchsiifolia 7 Diploid 1.00 60.22
cuphea gaumeri 10 Polyploid 0.48 8.89
cuphea denticulata 8 Diploid 0.99 60.22
cuphea disperma 7 Diploid 1.00 60.22
cuphea ericoides 12 Polyploid 1.00 10.30
cuphea glutinosa 14 Polyploid 1.00 7.85
cuphea tolucana 12 Polyploid 1.00 10.15
cuphea setosa 11 Polyploid 0.99 11.85
cuphea salicifolia 8 Diploid 1.00 60.22
cuphea micrantha 8 Diploid 0.99 60.22
cuphea lutea 14 Polyploid 1.00 7.93
cuphea acinifolia 7 Diploid 1.00 60.22
cuphea watsoniana 16 Polyploid 1.00 10.44
cuphea utriculosa 11 Polyploid 0.97 11.83
cuphea aequipetala 12 Polyploid 1.00 10.24
cuphea strigulosa 8 Diploid 0.98 60.22
cuphea spermacoce 15 Polyploid 1.00 13.04
cuphea spectabilis 15 Polyploid 1.00 13.09
cuphea wrightii 10 Polyploid 0.54 8.66
cuphea parsonsia 16 Polyploid 1.00 10.27
cuphea melvilla 16 Polyploid 1.00 10.52
cuphea melanium 8 Diploid 0.98 60.22
cuphea mimuloides 11 Polyploid 0.99 11.47
cuphea micropetala 16 Polyploid 1.00 10.37
cuphea ignea 16 Polyploid 1.00 9.98
cuphea hyssopoides 9 Diploid 0.50 60.22
cuphea lutescens 7 Diploid 1.00 60.22
cuphea ingrata 14 Polyploid 1.00 7.82
cuphea circaeoides 11 Polyploid 0.99 11.43
cuphea calophylla subsp. mesostemon 8 Diploid 0.99 60.22
cuphea decandra 16 Polyploid 1.00 10.46
cuphea cyanea 6 Diploid 0.99 60.22
cuphea paucipetala 10 Polyploid 0.56 8.22
cuphea koehneana 12 Polyploid 1.00 9.94
cuphea confertiflora 9 Diploid 0.60 60.22
cuphea avigera var. pulcherrima 8 Diploid 1.00 60.22
cuphea linarioides 9 Diploid 0.60 60.22
cuphea lophostoma 8 Diploid 1.00 60.22
cuphea bustamanta 12 Polyploid 1.00 10.34
cuphea calcarata 7 Diploid 0.99 60.22
cuphea crassiflora 12 Polyploid 1.00 9.91
cuphea jorullensis 16 Polyploid 1.00 10.44
cuphea cordata 32 Polyploid 1.00 10.62
cuphea thymoides 18 Polyploid 1.00 9.48
cuphea urens 8 Diploid 0.99 60.22
cuphea teleandra 7 Diploid 0.99 60.22
cuphea sessilifolia 14 Polyploid 1.00 7.99
cuphea lanceolata 6 Diploid 0.99 60.22
cuphea leptopoda 8 Diploid 1.00 60.22
cuphea inflata 10 Polyploid 0.44 8.53
cuphea diosmifolia 7 Diploid 0.99 60.22
cuphea acicularis 18 Polyploid 1.00 9.57
cuphea lobophora 10 Polyploid 0.58 9.06
cuphea antisyphilitica 16 Polyploid 1.00 10.16
cuphea persistens 12 Polyploid 1.00 10.17
cuphea linifolia 16 Polyploid 1.00 9.94
cuphea ferrisiae 11 Polyploid 0.99 11.08
cuphea polymorpha 8 Diploid 0.99 60.22
cuphea gracilis 8 Diploid 1.00 60.22
cuphea ferruginea 9 Diploid 0.68 60.22
cuphea pterosperma 16 Polyploid 1.00 10.38
cuphea urbaniana 16 Polyploid 1.00 9.99
cuphea campestris 8 Diploid 0.99 60.22
cuphea grandiflora 16 Polyploid 1.00 10.49
cuphea acinos 7 Diploid 1.00 60.22
cuphea brachiata 8 Diploid 0.99 60.22
cuphea caesariata 18 Polyploid 1.00 9.38
cuphea calaminthifolia 12 Polyploid 1.00 10.41
cuphea campylocentra 8 Diploid 1.00 60.22
cuphea cuiabensis 16 Polyploid 1.00 10.09
cuphea cylindracea 24 Polyploid 1.00 10.23
cuphea dipetala 54 Polyploid 1.00 10.15
cuphea egleri 7 Diploid 1.00 60.22
cuphea elliptica 16 Polyploid 1.00 10.19
cuphea flavovirens 14 Polyploid 1.00 7.50
cuphea gardneri 14 Polyploid 1.00 7.76
cuphea glareosa 18 Polyploid 1.00 9.51
cuphea glossostoma 12 Polyploid 1.00 10.00
cuphea humifusa 18 Polyploid 1.00 9.51
cuphea impatientifolia 7 Diploid 1.00 60.22
cuphea laminuligera 10 Polyploid 0.50 8.73
cuphea myrtifolia 8 Diploid 0.99 60.22
cuphea nudicostata 30 Polyploid 1.00 10.23
cuphea odonellii 8 Diploid 1.00 60.22
cuphea painteri 12 Polyploid 1.00 10.03
cuphea pertenuis 12 Polyploid 1.00 10.32
cuphea pinetorum 11 Polyploid 1.00 11.28
cuphea quaternata 32 Polyploid 1.00 10.31
cuphea ramosissima 10 Polyploid 0.53 9.09
cuphea rasilis 16 Polyploid 1.00 10.12
cuphea retroscabra 56 Polyploid 1.00 9.38
cuphea sclerophylla 36 Polyploid 1.00 10.16
cuphea sincorana 14 Polyploid 1.00 8.03
cuphea trochilus 10 Polyploid 0.60 8.74
cuphea tuberosa 7 Diploid 1.00 60.22
cuphea varia 16 Polyploid 1.00 10.32
cuphea vesiculigera 12 Polyploid 1.00 10.29
cuphea viscosa 13 Polyploid 1.00 11.37
cuphea viscosissima 6 Diploid 0.99 60.22
cuphea vargasii 8 Diploid 0.98 60.22
cuphea reflexifolia 8 Diploid 1.00 60.22
cuphea caeciliae 30 Polyploid 1.00 10.32
cuphea calophylla 8 Diploid 0.99 60.22
cuphea avigera 10 Polyploid 0.51 8.79
cuphea megalophylla 16 Polyploid 1.00 10.36
cuphea carthagenensis 8 Diploid 0.99 60.22
cuphea ramiflora 7 Diploid 0.98 60.22
cuphea appendiculata var. axilliflora 84 Polyploid 1.00 9.55
pleurophora anomala 7 Diploid 0.97 60.22
physocalymma scaberrimum 8 Diploid 0.90 60.22
adenaria floribunda 16 Polyploid 1.00 1.30
pehria compacta 16 Polyploid 1.00 1.29
woodfordia fruticosa 8 Diploid 0.99 60.22
koehneria madagascariensis 24 Polyploid 1.00 5.70
diplusodon paraisoensis 15 Polyploid 1.00 39.01
diplusodon glaucescens 15 Polyploid 1.00 39.01
diplusodon ramosissimus 15 Polyploid 1.00 39.01
diplusodon villosus 15 Polyploid 1.00 39.01
diplusodon sordidus 15 Polyploid 1.00 39.01
diplusodon virgatus 15 Polyploid 1.00 39.01
diplusodon alatus 15 Polyploid 1.00 39.01
diplusodon bradei 15 Polyploid 1.00 39.01
diplusodon hexander 15 Polyploid 1.00 39.01
diplusodon ulei 15 Polyploid 1.00 39.01
diplusodon smithii 15 Polyploid 1.00 39.01
diplusodon oblongus 15 Polyploid 1.00 39.01
ginoria nudiflora 28 Polyploid 1.00 11.44
ginoria rohrii 28 Polyploid 1.00 12.17
ginoria glabra 28 Polyploid 1.00 11.92
pemphis acidula 16 Polyploid 1.00 24.49
crenea patentinervis 32 Polyploid 1.00 23.84



Phylogenetic Tree:


Download tree:   phyloXML    newick

Tree Legend: Blue: Diploids , Red: Polyploids
Use your mouse to drag, zoom and modify the tree. CTRL + wheel = scale Y, ALT + wheel = scale X