Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

colchicaceae










Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Ploidy age ?
disporum viridescens 8 Polyploid 0.75 2.10
disporum smilacinum 8 Polyploid 0.75 2.10
disporum nantouense 8 Polyploid 0.75 9.16
disporum sessile 8 Polyploid 0.75 9.16
disporum lutescens 8 Polyploid 0.75 9.16
disporum uniflorum 8 Polyploid 0.75 1.22
disporum kawakamii 8 Polyploid 0.75 1.22
disporum shimadae 7 Polyploid 0.75 0.88
disporum cantoniense 8 Polyploid 0.75 9.16
disporum longistylum 8 Polyploid 0.75 9.16
disporum leucanthum 8 Polyploid 0.75 2.19
disporum calcaratum 8 Polyploid 0.75 1.04
disporum hishiyamanum 8 Polyploid 0.75 1.27
disporum bodinieri 8 Polyploid 0.75 0.80
disporum cantoniense var. multiflorum 7 Polyploid 0.75 0.84
disporum megalanthum 8 Polyploid 0.75 2.03
uvularia floridana 6 Uncertain 6.73
uvularia sessilifolia 7 Polyploid 0.50 4.45
uvularia puberula 7 Polyploid 0.44 4.05
uvularia grandiflora 7 Polyploid 0.42 3.71
uvularia perfoliata 7 Polyploid 0.49 3.65
burchardia monantha 24 Polyploid 1.00 4.33
burchardia multiflora 48 Polyploid 1.00 4.31
burchardia umbellata 12 Polyploid 1.00 2.13
burchardia congesta 12 Polyploid 1.00 2.25
colchicum bivonae 18 Polyploid 1.00 10.43
kuntheria pedunculata 7 Polyploid 0.54 5.16
schelhammera undulata 18 Polyploid 1.00 5.33
tripladenia cunninghamii 7 Polyploid 0.42 1.36
schelhammera multiflora 7 Polyploid 0.43 1.58
camptorrhiza strumosa 11 Polyploid 0.98 5.25
iphigenia pallida 11 Polyploid 0.98 0.92
iphigenia mysorensis 11 Polyploid 0.98 0.92
iphigenia indica 11 Polyploid 0.98 0.92
iphigenia stellata 11 Polyploid 0.98 0.92
iphigenia magnifica 11 Polyploid 0.98 0.92
iphigenia novae-zelandiae 10 Polyploid 0.98 0.47
baeometra uniflora 11 Polyploid 0.98 9.41
wurmbea variabilis 7 Polyploid 0.43 1.00
wurmbea marginata 7 Polyploid 0.42 1.04
wurmbea stricta 10 Polyploid 0.96 6.85
wurmbea dioica 10 Polyploid 0.97 6.76
gloriosa modesta 11 Polyploid 0.98 5.27
gloriosa superba 11 Polyploid 0.99 5.25
colchicum tuviae 7 Polyploid 0.90 1.60
colchicum munzurense 12 Polyploid 1.00 0.31
colchicum hirsutum 7 Polyploid 0.91 0.40
colchicum varians 23 Polyploid 1.00 2.28
colchicum paschei 24 Polyploid 1.00 1.87
colchicum sfikasianum 27 Polyploid 1.00 0.45
colchicum pulchellum 27 Polyploid 1.00 0.47
colchicum davisii 23 Polyploid 1.00 1.44
colchicum tunicatum 27 Polyploid 1.00 0.62
colchicum burttii 27 Polyploid 1.00 0.57
colchicum persicum 27 Polyploid 1.00 0.46
colchicum arenarium 19 Polyploid 1.00 0.83
colchicum multiflorum 72 Polyploid 1.00 0.01
colchicum longifolium 9 Polyploid 1.00 1.70
colchicum polyphyllum 11 Polyploid 1.00 0.72
colchicum feinbruniae 11 Polyploid 1.00 0.72
colchicum szovitsii subsp. brachyphyllum 9 Polyploid 1.00 4.00
colchicum szovitsii 9 Polyploid 1.00 4.00
colchicum chimonanthum 16 Polyploid 1.00 0.14
colchicum triphyllum 25 Polyploid 1.00 0.14
colchicum baytopiorum 23 Polyploid 1.00 0.53
colchicum sanguicolle 11 Polyploid 1.00 4.00
colchicum cretense 18 Polyploid 1.00 0.38
colchicum asteranthum 18 Polyploid 1.00 0.38
colchicum minutum 22 Polyploid 1.00 0.58
colchicum stevenii 27 Polyploid 1.00 0.41
colchicum peloponnesiacum 22 Polyploid 1.00 0.34
colchicum wendelboi 12 Polyploid 1.00 0.43
colchicum manissadjianii 11 Polyploid 1.00 4.00
colchicum bulbocodium subsp. versicolor 11 Polyploid 1.00 4.00
colchicum eichleri 9 Polyploid 1.00 4.00
colchicum mirzoevae 9 Polyploid 1.00 4.00
colchicum trigynum 9 Polyploid 1.00 4.00
colchicum bulbocodium 11 Polyploid 1.00 1.55
colchicum kesselringii 27 Polyploid 1.00 0.09
colchicum luteum 19 Polyploid 1.00 1.35
colchicum robustum 27 Polyploid 1.00 1.31
colchicum soboliferum 21 Polyploid 1.00 0.64
colchicum atticum 27 Polyploid 1.00 0.67
colchicum doerfleri 27 Polyploid 1.00 2.46
colchicum macrophyllum 27 Polyploid 1.00 0.88
colchicum balansae 54 Polyploid 1.00 0.85
colchicum inundatum 27 Polyploid 1.00 0.58
colchicum variegatum 22 Polyploid 1.00 0.31
colchicum troodi 27 Polyploid 1.00 0.65
colchicum chlorobasis 27 Polyploid 1.00 0.62
colchicum cilicicum 27 Polyploid 1.00 0.62
colchicum boissieri 18 Polyploid 1.00 1.50
colchicum micranthum 27 Polyploid 1.00 0.64
colchicum dolichantherum 27 Polyploid 1.00 0.61
colchicum decaisnei 27 Polyploid 1.00 1.25
colchicum heldreichii 27 Polyploid 1.00 1.25
colchicum imperatoris-friderici 27 Polyploid 1.00 1.25
colchicum crocifolium 7 Polyploid 0.93 0.95
colchicum leptanthum 9 Polyploid 0.98 0.59
colchicum schimperi 7 Polyploid 0.93 3.78
colchicum ritchii 7 Polyploid 0.93 3.78
colchicum serpentinum 6 Polyploid 0.93 3.78
colchicum antilibanoticum 7 Polyploid 0.93 0.53
colchicum fasciculare 7 Polyploid 0.93 3.78
colchicum kotschyi 10 Polyploid 0.96 1.54
colchicum freynii 9 Polyploid 0.93 1.88
colchicum androcymbioides 27 Polyploid 1.00 1.10
colchicum montanum 27 Polyploid 1.00 1.11
colchicum figlalii 27 Polyploid 1.00 1.36
colchicum rausii 27 Polyploid 1.00 1.43
colchicum alpinum 27 Polyploid 1.00 1.43
colchicum macedonicum 27 Polyploid 1.00 1.43
colchicum euboeum 27 Polyploid 1.00 0.69
colchicum micaceum 27 Polyploid 1.00 1.44
colchicum filifolium 27 Polyploid 1.00 1.44
colchicum autumnale 19 Polyploid 1.00 1.58
colchicum umbrosum 12 Polyploid 1.00 1.47
colchicum parnassicum 27 Polyploid 1.00 1.53
colchicum lusitanum 53 Polyploid 1.00 0.31
colchicum turcicum 26 Polyploid 1.00 0.21
colchicum neapolitanum 70 Polyploid 1.00 0.30
colchicum laetum 21 Polyploid 1.00 0.59
colchicum confusum 20 Polyploid 1.00 0.59
colchicum haynaldii 48 Polyploid 1.00 0.29
colchicum graecum 22 Polyploid 1.00 0.59
colchicum speciosum 19 Polyploid 1.00 0.59
colchicum corsicum 108 Polyploid 1.00 0.27
colchicum arenasii 81 Polyploid 1.00 0.30
colchicum gonarei 90 Polyploid 1.00 2.94
colchicum pusillum 27 Polyploid 1.00 2.07
colchicum woronowii 21 Polyploid 1.00 1.17
colchicum parlatoris 27 Polyploid 1.00 1.24
colchicum raddeanum 9 Polyploid 0.93 1.55
colchicum kurdicum 10 Polyploid 0.94 1.68
androcymbium walteri 10 Polyploid 0.94 2.90
androcymbium cuspidatum 10 Polyploid 0.94 3.08
androcymbium poeltianum 9 Polyploid 0.94 1.59
androcymbium bellum 10 Polyploid 0.94 1.51
androcymbium dregei 10 Polyploid 0.95 3.39
androcymbium capense 11 Polyploid 0.96 3.64
androcymbium hantamense 10 Polyploid 0.94 2.95
androcymbium eghimocymbion 10 Polyploid 0.94 2.95
androcymbium villosum 10 Polyploid 0.94 1.50
androcymbium henssenianum 10 Polyploid 0.94 1.64
androcymbium burchellii subsp. pulchrum 11 Polyploid 0.94 1.09
androcymbium circinatum 10 Polyploid 0.94 1.42
androcymbium irroratum 10 Polyploid 0.94 2.60
androcymbium palaestinum 9 Polyploid 0.92 1.23
androcymbium rechingeri 9 Polyploid 0.92 0.81
androcymbium hierrense 9 Polyploid 0.92 3.20
androcymbium psammophilum 9 Polyploid 0.92 3.20
androcymbium europaeum 9 Polyploid 0.92 0.49
androcymbium austrocapense 10 Polyploid 0.93 0.75
androcymbium longipes 9 Polyploid 0.92 3.20
androcymbium eucomoides 10 Polyploid 0.92 1.25
hexacyrtis dickiana 11 Polyploid 0.98 7.25
androcymbium huntleyi 9 Polyploid 0.88 4.33
ornithoglossum vulgare 12 Polyploid 1.00 3.05
ornithoglossum parviflorum 12 Polyploid 1.00 0.97
ornithoglossum zeyheri 12 Polyploid 1.00 0.73
ornithoglossum undulatum 12 Polyploid 1.00 0.84
sandersonia aurantiaca 12 Polyploid 0.99 6.36
androcymbium albanense subsp. clanwilliamense 10 Polyploid 0.92 7.15
androcymbium gramineum 9 Polyploid 0.90 7.28
androcymbium burchellii 11 Polyploid 0.99 7.72
colchicum hierosolymitanum 9 Polyploid 0.90 15.88
colchicum cupanii subsp. glossophyllum 27 Polyploid 1.00 15.67
colchicum hungaricum 27 Polyploid 1.00 15.24
colchicum lusitanicum 53 Polyploid 1.00 15.89
colchicum chalcedonicum 25 Polyploid 1.00 16.10
colchicum cupanii 27 Polyploid 1.00 15.28
colchicum lingulatum 24 Polyploid 1.00 15.23
colchicum liparochiadys 21 Polyploid 1.00 15.37
colchicum zahnii 27 Polyploid 1.00 15.12



Phylogenetic Tree:


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Tree Legend: Blue: Diploids , Red: Polyploids
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