Prof. Itay Mayrose Lab - Plant Evolution, bioinformatics, & comparative genomics

berberidaceae










Ploidy Estimates:

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Chromosome count ? Ploidy inference ? Ploidy classification reliability ? Ploidy age ?
nandina domestica 10 Polyploid 0.98 14.71
podophyllum peltatum 6 Diploid 1.00 123.26
sinopodophyllum hexandrum 6 Diploid 1.00 123.26
jeffersonia diphylla 6 Diploid 1.00 123.26
plagiorhegma dubium 6 Diploid 1.00 123.26
achlys triphylla 6 Diploid 1.00 123.26
achlys japonica 6 Diploid 1.00 123.26
achlys triphylla subsp. californica 12 Polyploid 1.00 0.51
diphylleia sinensis 6 Diploid 1.00 123.26
diphylleia cymosa 6 Diploid 1.00 123.26
diphylleia grayi 6 Diploid 1.00 123.26
dysosma delavayi 6 Diploid 1.00 123.26
dysosma pleiantha 6 Diploid 1.00 123.26
dysosma versipellis 6 Diploid 1.00 123.26
dysosma veitchii 6 Diploid 1.00 123.26
bongardia chrysogonum 7 Diploid 1.00 123.26
epimedium youngianum 6 Diploid 1.00 123.26
epimedium sasakii 6 Diploid 1.00 123.26
epimedium setosum 6 Diploid 1.00 123.26
epimedium pubescens 6 Diploid 1.00 123.26
epimedium pinnatum subsp. colchicum 6 Diploid 1.00 123.26
epimedium acuminatum 6 Diploid 1.00 123.26
epimedium pinnatum 6 Diploid 1.00 123.26
epimedium perralderianum 6 Diploid 1.00 123.26
epimedium diphyllum 6 Diploid 1.00 123.26
epimedium macrosepalum 6 Diploid 1.00 123.26
epimedium grandiflorum 6 Diploid 1.00 123.26
epimedium koreanum 6 Diploid 1.00 123.26
epimedium pubigerum 6 Diploid 1.00 123.26
epimedium trifoliatobinatum 6 Diploid 1.00 123.26
epimedium alpinum 6 Diploid 1.00 123.26
epimedium membranaceum 6 Diploid 1.00 123.26
epimedium sagittatum 6 Diploid 1.00 123.26
epimedium warleyense 6 Diploid 1.00 123.26
epimedium grandiflorum var. thunbergianum 6 Diploid 1.00 123.26
epimedium sempervirens 6 Diploid 1.00 123.26
epimedium rubrum 6 Diploid 1.00 123.26
epimedium versicolor 6 Diploid 1.00 123.26
epimedium diphyllum subsp. kitamuranum 6 Diploid 1.00 123.26
vancouveria hexandra 6 Diploid 1.00 123.26
vancouveria planipetala 12 Polyploid 1.00 0.55
vancouveria chrysantha 6 Diploid 1.00 123.26
caulophyllum thalictroides 8 Diploid 1.00 123.26
caulophyllum robustum 8 Diploid 1.00 123.26
caulophyllum giganteum 8 Diploid 1.00 123.26
gymnospermium altaicum 8 Diploid 1.00 123.26
gymnospermium smirnovii 8 Diploid 1.00 123.26
gymnospermium albertii 8 Diploid 1.00 123.26
gymnospermium darwasicum 8 Diploid 1.00 123.26
gymnospermium maloi 7 Diploid 1.00 123.26
gymnospermium odessanum 8 Diploid 1.00 123.26
gymnospermium peloponnesiacum 8 Diploid 1.00 123.26
leontice leontopetalum 8 Diploid 1.00 123.26
ranzania japonica 7 Diploid 1.00 123.26
berberis dielsiana 14 Polyploid 1.00 13.24
berberis dictyophylla 14 Polyploid 1.00 13.24
berberis tischleri 14 Polyploid 1.00 13.24
berberis lycium 14 Polyploid 1.00 13.24
berberis ottawensis 14 Polyploid 1.00 13.24
berberis aggregata 14 Polyploid 1.00 13.24
berberis ruscifolia 14 Polyploid 1.00 13.24
berberis chinensis 14 Polyploid 1.00 13.24
berberis yunnanensis 14 Polyploid 1.00 13.24
berberis aemulans 14 Polyploid 1.00 13.24
berberis beaniana 14 Polyploid 1.00 13.24
berberis dasystachya 14 Polyploid 1.00 13.24
berberis francisci-ferdinandi 14 Polyploid 1.00 13.24
berberis heterobotrys 28 Polyploid 1.00 1.40
berberis mouillacana 14 Polyploid 1.00 13.24
berberis polyantha 14 Polyploid 1.00 13.24
berberis purdomii 14 Polyploid 1.00 13.24
berberis serratodentata 14 Polyploid 1.00 13.24
berberis veitchii 14 Polyploid 1.00 13.24
berberis virescens 14 Polyploid 1.00 13.24
berberis pinnata 14 Polyploid 1.00 13.24
berberis repens 14 Polyploid 1.00 13.24
berberis piperiana 14 Polyploid 1.00 13.24
berberis aquifolium 14 Polyploid 1.00 13.24
berberis circumserrata 14 Polyploid 1.00 13.24
berberis coriaria 14 Polyploid 1.00 13.24
berberis umbellata 14 Polyploid 1.00 13.24
berberis aristata 14 Polyploid 1.00 13.24
berberis tinctoria 14 Polyploid 1.00 13.24
berberis chitria 14 Polyploid 1.00 13.24
berberis edgeworthiana 14 Polyploid 1.00 13.24
berberis vernae 14 Polyploid 1.00 13.24
berberis koreana 14 Polyploid 1.00 13.24
berberis fendleri 14 Polyploid 1.00 13.24
berberis canadensis 14 Polyploid 1.00 13.24
berberis amurensis 14 Polyploid 1.00 13.24
berberis cretica 14 Polyploid 1.00 13.24
berberis vulgaris 14 Polyploid 1.00 13.24
berberis integerrima 14 Polyploid 1.00 13.24
berberis aetnensis 14 Polyploid 1.00 13.24
berberis heteropoda 14 Polyploid 1.00 13.24
berberis thunbergii 14 Polyploid 1.00 13.24
berberis concinna 14 Polyploid 1.00 13.24
berberis asiatica 14 Polyploid 1.00 13.24
berberis gagnepainii 14 Polyploid 1.00 13.24
berberis verruculosa 14 Polyploid 1.00 13.24
berberis levis 14 Polyploid 1.00 13.24
berberis wallichiana 14 Polyploid 1.00 13.24
berberis atrocarpa 14 Polyploid 1.00 13.24
berberis barandana 14 Polyploid 1.00 13.24
berberis candidula 14 Polyploid 1.00 13.24
berberis sargentiana 14 Polyploid 1.00 13.24
berberis pruinosa 14 Polyploid 1.00 13.24
berberis julianae 14 Polyploid 1.00 13.24
berberis soulieana 14 Polyploid 1.00 13.24
berberis angulosa 14 Polyploid 1.00 13.24
berberis brachypoda 14 Polyploid 1.00 13.24
berberis gilgiana 14 Polyploid 1.00 13.24
berberis poiretii 14 Polyploid 1.00 13.24
berberis nummularia 14 Polyploid 1.00 13.24
berberis sieboldii 14 Polyploid 1.00 13.24
berberis microphylla 24 Polyploid 1.00 0.31
berberis montana 14 Polyploid 1.00 13.24
berberis actinacantha 28 Polyploid 1.00 0.03
berberis cabrerae 14 Polyploid 1.00 13.24
berberis empetrifolia 14 Polyploid 1.00 13.24
berberis ilicifolia 14 Polyploid 1.00 13.24
berberis darwinii 14 Polyploid 1.00 13.24
berberis bidentata 14 Polyploid 1.00 13.24
berberis trigona 14 Polyploid 1.00 13.24
berberis nervosa 28 Polyploid 1.00 1.01
berberis japonica 14 Polyploid 1.00 13.24
berberis orthobotrys 24 Polyploid 1.00 1.43
berberis anhweiensis 14 Polyploid 1.00 13.24
berberis nepalensis 14 Polyploid 1.00 13.24
berberis vulgaris subsp. australis 14 Polyploid 1.00 13.24
berberis leschenaultii 14 Polyploid 1.00 13.24
berberis amplectens 14 Polyploid 1.00 13.24
berberis pumila 14 Polyploid 1.00 13.24
berberis oblonga 14 Polyploid 1.00 13.24
berberis ulicina 14 Polyploid 1.00 13.24
berberis sonnei 14 Polyploid 1.00 13.24
berberis thibetica 14 Polyploid 1.00 13.24
berberis vulgaris subsp. seroi 14 Polyploid 1.00 13.24
berberis ceratophylla 14 Polyploid 1.00 13.24
berberis brevipaniculata 14 Polyploid 1.00 13.24
berberis turcomanica 28 Polyploid 1.00 1.42



Phylogenetic Tree:


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Tree Legend: Blue: Diploids , Red: Polyploids
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